Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02200 and BSU13080

See DNA alignment / Visit BSNT_02200 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:45
# Commandline: needle
#    -asequence pep-align/BSNT_02200___ykkB.1.22522.seq
#    -bsequence pep-align/BSU13080___ykkB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02200___ykkB-BSU13080___ykkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02200___ykkB-BSU13080___ykkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02200___ykkB
# 2: BSU13080___ykkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     168/172 (97.7%)
# Similarity:   170/172 (98.8%)
# Gaps:           0/172 ( 0.0%)
# Score: 909.0
# 
#
#=======================================

BSNT_02200___      1 MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTRE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk      1 MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQTRE     50

BSNT_02200___     51 WVNWNQRNEKGYGVSLWIAEDKRTGEFLGQCGTVPQQIENQTVMEIGYMF    100
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU13080___yk     51 WVNWNQRNEKGYGVSLWIAEDKRTGEFLGQCGIVPQQIENQTVMEIGYMF    100

BSNT_02200___    101 ARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIGM    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk    101 ARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKIGM    150

BSNT_02200___    151 HHSETTRKWNKPIAVYERKSYN    172
                     |:|:|.||||||||||||||||
BSU13080___yk    151 HYSKTIRKWNKPIAVYERKSYN    172


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