Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02200 and BSU13080

See Amino acid alignment / Visit BSNT_02200 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:45
# Commandline: needle
#    -asequence dna-align/BSNT_02200___ykkB.1.22522.seq
#    -bsequence dna-align/BSU13080___ykkB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02200___ykkB-BSU13080___ykkB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02200___ykkB-BSU13080___ykkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02200___ykkB
# 2: BSU13080___ykkB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     512/519 (98.7%)
# Similarity:   512/519 (98.7%)
# Gaps:           0/519 ( 0.0%)
# Score: 2532.0
# 
#
#=======================================

BSNT_02200___      1 ATGAACGCTAAAACGAAGCTTGTGACCGATCGAATTCGTTTGCGCTGTAT     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU13080___yk      1 ATGAACGCTAAAACGAAGCTTGTGACTGATCGAATTCGTTTGCGCTGTAT     50

BSNT_02200___     51 GGAAGATCGGGATCAAGCCACTTTGTTTGGGCTGCTTTTTAATGATCCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk     51 GGAAGATCGGGATCAAGCCACTTTGTTTGGGCTGCTTTTTAATGATCCTG    100

BSNT_02200___    101 ACGTCATGACATATTATTCCGGTTTAAAAGATAAGAGGCAAACCCGCGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk    101 ACGTCATGACATATTATTCCGGTTTAAAAGATAAGAGGCAAACCCGCGAG    150

BSNT_02200___    151 TGGGTCAATTGGAACCAACGAAATGAAAAAGGGTACGGCGTTAGTCTGTG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk    151 TGGGTCAATTGGAACCAACGAAATGAAAAAGGGTACGGCGTTAGTCTGTG    200

BSNT_02200___    201 GATCGCCGAAGATAAGCGGACAGGGGAGTTTTTGGGGCAATGCGGCACTG    250
                     |||||||||||||||||||||||||||||||||||||||||||||||..|
BSU13080___yk    201 GATCGCCGAAGATAAGCGGACAGGGGAGTTTTTGGGGCAATGCGGCATCG    250

BSNT_02200___    251 TTCCCCAGCAGATCGAAAATCAAACCGTAATGGAAATTGGCTATATGTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk    251 TTCCCCAGCAGATCGAAAATCAAACCGTAATGGAAATTGGCTATATGTTT    300

BSNT_02200___    301 GCCCGCCGCCACTGGGGGAACGGCTATGCGCAAGAAGCGGCTCGGGCCTG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk    301 GCCCGCCGCCACTGGGGGAACGGCTATGCGCAAGAAGCGGCTCGGGCCTG    350

BSNT_02200___    351 TCTGGACTATGGCTTTAACGAGCGGCAGTTCGGCAAAATGGCGGCTTTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13080___yk    351 TCTGGACTATGGCTTTAACGAGCGGCAGTTCGGCAAAATGGCGGCTTTGA    400

BSNT_02200___    401 TTGATCCGGGTAACAAAGCGTCCATACGGGTAGCGGAGAAAATCGGTATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU13080___yk    401 TTGATCCGGGTAACAAAGCGTCCATACGGGTAGCGGAGAAAATCGGCATG    450

BSNT_02200___    451 CATCACAGCGAAACGACCAGAAAATGGAATAAACCGATCGCGGTATATGA    500
                     |||.|||||.||||||.|||||||||||||||||||||||||||||||||
BSU13080___yk    451 CATTACAGCAAAACGATCAGAAAATGGAATAAACCGATCGCGGTATATGA    500

BSNT_02200___    501 AAGAAAATCTTACAATTGA    519
                     |||||||||||||||||||
BSU13080___yk    501 AAGAAAATCTTACAATTGA    519


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