Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02184 and BSU12950

See DNA alignment / Visit BSNT_02184 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:43
# Commandline: needle
#    -asequence pep-align/BSNT_02184___dppD.1.22522.seq
#    -bsequence pep-align/BSU12950___dppD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02184___dppD-BSU12950___dppD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02184___dppD-BSU12950___dppD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02184___dppD
# 2: BSU12950___dppD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     328/335 (97.9%)
# Similarity:   331/335 (98.8%)
# Gaps:           0/335 ( 0.0%)
# Score: 1690.0
# 
#
#=======================================

BSNT_02184___      1 MEKVLSVQNLHVSFTTYGGTVQAVRGVSFDLYQGETFAIVGESGCGKSVT     50
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
BSU12950___dp      1 MEKVLSVQNLHVSFTTYGGTVQAVRGVSFDLYKGETFAIVGESGCGKSVT     50

BSNT_02184___     51 SQSIMGLLPPYSAKVTDGSILFKNIDLCRLSDKEMRGIRGADISMIFQDP    100
                     ||||||||||||||||||.|||||.|||||||||||||||||||||||||
BSU12950___dp     51 SQSIMGLLPPYSAKVTDGRILFKNKDLCRLSDKEMRGIRGADISMIFQDP    100

BSNT_02184___    101 MTALNPTLTVGDQLGEALLRHKKMSKKAARKEVLSMLSLVGIPDPEERLK    150
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU12950___dp    101 MTALNPTLTVGDQLGEALLRHKKMSKKAARKEVLSMLSLVGIPDPGERLK    150

BSNT_02184___    151 QYPHQFSGGMRQRIVIAMALICEPDILIADEPTTALDVTIQAQILELFKE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    151 QYPHQFSGGMRQRIVIAMALICEPDILIADEPTTALDVTIQAQILELFKE    200

BSNT_02184___    201 IQRKTNVSVILITHDLGVVAQVADRVAVMYTGKMAEIGTRKDIFYQPQHP    250
                     |||||:||||||||||||||||||||||||.|||||||||||||||||||
BSU12950___dp    201 IQRKTDVSVILITHDLGVVAQVADRVAVMYAGKMAEIGTRKDIFYQPQHP    250

BSNT_02184___    251 YTKGLLGSVPRLDLDGAELTPIDGTPPDLFSPPPGCPFAARCPNRMVVCD    300
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BSU12950___dp    251 YTKGLLGSVPRLDLNGAELTPIDGTPPDLFSPPPGCPFAARCPNRMVVCD    300

BSNT_02184___    301 RVYPGQTIRSDSHTVNCWLQDQRAEHAVLSGDAKD    335
                     |||||||||||||||||||||||||||||||||||
BSU12950___dp    301 RVYPGQTIRSDSHTVNCWLQDQRAEHAVLSGDAKD    335


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