Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02184 and BSU12950

See Amino acid alignment / Visit BSNT_02184 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:43
# Commandline: needle
#    -asequence dna-align/BSNT_02184___dppD.1.22522.seq
#    -bsequence dna-align/BSU12950___dppD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02184___dppD-BSU12950___dppD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02184___dppD-BSU12950___dppD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02184___dppD
# 2: BSU12950___dppD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1008
# Identity:     998/1008 (99.0%)
# Similarity:   998/1008 (99.0%)
# Gaps:           0/1008 ( 0.0%)
# Score: 4950.0
# 
#
#=======================================

BSNT_02184___      1 ATGGAAAAAGTTCTGTCAGTCCAAAATCTGCACGTGTCTTTTACGACTTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp      1 ATGGAAAAAGTTCTGTCAGTCCAAAATCTGCACGTGTCTTTTACGACTTA     50

BSNT_02184___     51 CGGCGGGACGGTTCAGGCGGTCAGAGGGGTGAGCTTTGATTTGTATCAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU12950___dp     51 CGGCGGGACGGTTCAGGCGGTCAGAGGGGTGAGCTTTGATTTGTATAAAG    100

BSNT_02184___    101 GAGAAACCTTTGCGATCGTCGGCGAATCCGGCTGCGGCAAAAGCGTGACC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU12950___dp    101 GAGAAACCTTTGCGATCGTCGGCGAATCCGGCTGCGGCAAAAGCGTTACC    150

BSNT_02184___    151 TCCCAAAGCATCATGGGCCTGCTTCCGCCTTATTCGGCGAAGGTGACAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    151 TCCCAAAGCATCATGGGCCTGCTTCCGCCTTATTCGGCGAAGGTGACAGA    200

BSNT_02184___    201 CGGCAGCATTCTATTTAAAAACATAGACCTTTGCCGTCTCTCTGACAAAG    250
                     ||||||.||||||||||||||||.||||||||||||||||||||||||||
BSU12950___dp    201 CGGCAGGATTCTATTTAAAAACAAAGACCTTTGCCGTCTCTCTGACAAAG    250

BSNT_02184___    251 AAATGAGAGGTATAAGGGGAGCCGACATTTCTATGATTTTTCAAGACCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    251 AAATGAGAGGTATAAGGGGAGCCGACATTTCTATGATTTTTCAAGACCCG    300

BSNT_02184___    301 ATGACGGCGTTAAACCCTACGCTGACTGTCGGCGACCAGCTGGGGGAAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    301 ATGACGGCGTTAAACCCTACGCTGACTGTCGGCGACCAGCTGGGGGAAGC    350

BSNT_02184___    351 GCTATTGCGCCACAAAAAAATGAGCAAAAAAGCGGCACGGAAAGAGGTGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    351 GCTATTGCGCCACAAAAAAATGAGCAAAAAAGCGGCACGGAAAGAGGTGC    400

BSNT_02184___    401 TTTCCATGCTGTCATTGGTTGGTATTCCAGATCCCGAAGAGCGCCTAAAG    450
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12950___dp    401 TTTCCATGCTGTCATTGGTTGGTATTCCAGATCCCGGAGAGCGCCTAAAG    450

BSNT_02184___    451 CAATATCCCCACCAATTCAGCGGCGGCATGAGACAGCGGATTGTCATTGC    500
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU12950___dp    451 CAATATCCCCACCAATTCAGCGGCGGTATGAGACAGCGGATTGTCATTGC    500

BSNT_02184___    501 GATGGCGCTGATTTGCGAGCCTGACATCTTAATTGCGGATGAACCGACCA    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12950___dp    501 GATGGCGCTGATTTGCGAGCCTGATATCTTAATTGCGGATGAACCGACCA    550

BSNT_02184___    551 CCGCCCTGGATGTAACCATTCAGGCACAGATTTTAGAGCTGTTTAAAGAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    551 CCGCCCTGGATGTAACCATTCAGGCACAGATTTTAGAGCTGTTTAAAGAG    600

BSNT_02184___    601 ATTCAGAGAAAAACGAATGTGTCTGTCATTCTGATTACGCACGATTTAGG    650
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12950___dp    601 ATTCAGAGAAAAACGGATGTGTCTGTCATTCTGATTACGCACGATTTAGG    650

BSNT_02184___    651 GGTTGTTGCCCAGGTAGCTGACAGAGTCGCAGTCATGTATACCGGGAAAA    700
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU12950___dp    651 GGTTGTTGCCCAGGTAGCTGACAGAGTCGCAGTCATGTATGCCGGGAAAA    700

BSNT_02184___    701 TGGCGGAAATCGGCACAAGAAAAGATATTTTTTATCAGCCGCAGCACCCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    701 TGGCGGAAATCGGCACAAGAAAAGATATTTTTTATCAGCCGCAGCACCCA    750

BSNT_02184___    751 TATACAAAAGGCCTGCTGGGCTCTGTCCCGCGGCTGGATTTAGATGGCGC    800
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12950___dp    751 TATACAAAAGGCCTGCTGGGCTCTGTCCCGCGGCTGGATTTAAATGGCGC    800

BSNT_02184___    801 TGAGCTGACCCCGATTGACGGAACGCCGCCGGATTTATTTTCGCCTCCGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    801 TGAGCTGACCCCGATTGACGGAACGCCGCCGGATTTATTTTCGCCTCCGC    850

BSNT_02184___    851 CGGGCTGCCCGTTTGCCGCCCGCTGTCCGAACAGGATGGTTGTGTGTGAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    851 CGGGCTGCCCGTTTGCCGCCCGCTGTCCGAACAGGATGGTTGTGTGTGAC    900

BSNT_02184___    901 AGGGTGTACCCGGGCCAGACGATCAGATCTGACTCGCACACCGTCAACTG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    901 AGGGTGTACCCGGGCCAGACGATCAGATCTGACTCGCACACCGTCAACTG    950

BSNT_02184___    951 CTGGCTGCAGGATCAACGAGCAGAGCATGCGGTGCTGTCAGGAGATGCGA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12950___dp    951 CTGGCTGCAGGATCAACGAGCAGAGCATGCGGTGCTGTCAGGAGATGCGA   1000

BSNT_02184___   1001 AGGATTGA   1008
                     ||||||||
BSU12950___dp   1001 AGGATTGA   1008


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02184 and BSU12950

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
