Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02178 and BSU12890

See DNA alignment / Visit BSNT_02178 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:42
# Commandline: needle
#    -asequence pep-align/BSNT_02178___ykcC.1.22522.seq
#    -bsequence pep-align/BSU12890___ykcC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02178___ykcC-BSU12890___ykcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02178___ykcC-BSU12890___ykcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02178___ykcC
# 2: BSU12890___ykcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity:     320/323 (99.1%)
# Similarity:   322/323 (99.7%)
# Gaps:           0/323 ( 0.0%)
# Score: 1642.0
# 
#
#=======================================

BSNT_02178___      1 MSRHIQYSIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDR     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk      1 MSRHIQYSIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDR     50

BSNT_02178___     51 SIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk     51 SIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQ    100

BSNT_02178___    101 DPPELILDMIEKWKEGYEVVYAVRTKRKGETFFKKQTAAMFYRLLSGMTD    150
                     |||||||:||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk    101 DPPELILEMIEKWKEGYEVVYAVRTKRKGETFFKKQTAAMFYRLLSGMTD    150

BSNT_02178___    151 IDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYVRD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk    151 IDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYVRD    200

BSNT_02178___    201 ERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLYMFI    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12890___yk    201 ERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGTGFLYMFI    250

BSNT_02178___    251 VLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDR    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk    251 VLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDR    300

BSNT_02178___    301 PLYIVQKSYGIESKRLYRDQHMS    323
                     ||||||||||||:||||||||||
BSU12890___yk    301 PLYIVQKSYGIENKRLYRDQHMS    323


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