Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02178 and BSU12890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:42
# Commandline: needle
# -asequence dna-align/BSNT_02178___ykcC.1.22522.seq
# -bsequence dna-align/BSU12890___ykcC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02178___ykcC-BSU12890___ykcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02178___ykcC-BSU12890___ykcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02178___ykcC
# 2: BSU12890___ykcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 972
# Identity: 959/972 (98.7%)
# Similarity: 959/972 (98.7%)
# Gaps: 0/972 ( 0.0%)
# Score: 4743.0
#
#
#=======================================
BSNT_02178___ 1 ATGAGCAGACATATTCAATATTCAATTGTTGTACCTGTGTATAATGAAGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 1 ATGAGCAGACATATTCAATATTCAATTGTTGTACCTGTGTATAATGAAGA 50
BSNT_02178___ 51 GCTTGTCATCCATGAAACCTATCAGCGCTTAAAAGAGGTCATGGATCAAA 100
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 51 GCTTGTCATTCATGAAACCTATCAGCGCTTAAAAGAGGTCATGGATCAAA 100
BSNT_02178___ 101 CGAAGGAAAACTACGAGCTGCTTTTTGTCAACGATGGCAGCAAAGACCGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 101 CGAAGGAAAACTACGAGCTGCTTTTTGTCAACGATGGCAGCAAAGACCGC 150
BSNT_02178___ 151 AGTATTGAGATTTTAAGAGAGCACAGCCTGATCGATCCGAGAGTGAAAAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 151 AGTATTGAGATTTTAAGAGAGCACAGCCTGATCGATCCGAGAGTGAAAAT 200
BSNT_02178___ 201 TATTGATTTTTCAAGGAATTTTGGACACCAGATCGCCATTACGGCGGGTA 250
|||||||||||||||||||||||||||.|||||||||||||||||.||||
BSU12890___yk 201 TATTGATTTTTCAAGGAATTTTGGACATCAGATCGCCATTACGGCAGGTA 250
BSNT_02178___ 251 TGGATTATGCACAGGGGAATGCAATCGTCGTCATTGACGCCGATTTGCAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 251 TGGATTATGCACAGGGGAATGCAATCGTCGTCATTGACGCCGATTTGCAG 300
BSNT_02178___ 301 GACCCTCCTGAACTGATTTTAGATATGATTGAAAAGTGGAAGGAAGGCTA 350
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU12890___yk 301 GACCCTCCTGAACTGATTTTAGAAATGATTGAAAAGTGGAAGGAAGGCTA 350
BSNT_02178___ 351 TGAGGTCGTGTACGCCGTGCGGACTAAACGAAAAGGGGAAACCTTTTTCA 400
|||.||||||||||||||.|||||||||||||||||||||||||||||||
BSU12890___yk 351 TGAAGTCGTGTACGCCGTACGGACTAAACGAAAAGGGGAAACCTTTTTCA 400
BSNT_02178___ 401 AAAAACAAACCGCGGCTATGTTTTACCGGCTTCTCAGCGGTATGACAGAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 401 AAAAACAAACCGCGGCTATGTTTTACCGGCTTCTCAGCGGTATGACAGAT 450
BSNT_02178___ 451 ATTGATATCCCGATTGATACGGGGGATTTTCGCCTCATGGACAGAAAAGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 451 ATTGATATCCCGATTGATACGGGGGATTTTCGCCTCATGGACAGAAAAGT 500
BSNT_02178___ 501 CTGTGATGAAATGAAGAGATTAAAAGAAAAAAATCCATTTGTCAGAGGGC 550
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12890___yk 501 CTGTGATGAAATGAAGAGATTAAAAGAAAAAAATCCATTTGTAAGAGGGC 550
BSNT_02178___ 551 TAGTCAGCTGGGTGGGCTTTAAACAGACAGCGGTCGAGTATGTACGTGAT 600
||||||||||||||||.||.||||||||||||||||||||||||||||||
BSU12890___yk 551 TAGTCAGCTGGGTGGGTTTCAAACAGACAGCGGTCGAGTATGTACGTGAT 600
BSNT_02178___ 601 GAAAGGCTTGCCGGAGAAACAAAGTACCCGCTCAAGAAAATGCTGAAGCT 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 601 GAAAGGCTCGCCGGAGAAACAAAGTACCCGCTCAAGAAAATGCTGAAGCT 650
BSNT_02178___ 651 GTCAATGGACGGCATCACGACATTTTCACATAAACCGCTGAAGCTGGCAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 651 GTCAATGGACGGCATCACGACATTTTCACATAAACCGCTGAAGCTGGCAA 700
BSNT_02178___ 701 GCTATGCGGGGATTTTAATGTCAGGTGCTGGATTTCTGTATATGTTTATC 750
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU12890___yk 701 GCTATGCGGGGATTTTAATGTCAGGTACTGGATTTCTGTATATGTTTATC 750
BSNT_02178___ 751 GTGCTGTATCTGAAGCTATTCACAGACAGCACGATTACCGGCTGGTCATC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 751 GTGCTGTATCTGAAGCTATTCACAGACAGCACGATTACCGGCTGGTCATC 800
BSNT_02178___ 801 ACTTATTGTGATCCAGCTCCTGTTCAGCGGCATTGTCCTTCTGATTTTGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 801 ACTTATTGTGATCCAGCTCCTGTTCAGCGGCATTGTCCTTCTGATTTTGG 850
BSNT_02178___ 851 GCGTGATCGGCGAATATATCGGCAGAATCTACGATGAAGCCAAAGACAGG 900
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU12890___yk 851 GCGTGATTGGCGAATATATCGGCAGAATCTACGATGAAGCCAAAGACAGG 900
BSNT_02178___ 901 CCGCTTTACATCGTCCAAAAATCGTATGGAATTGAAAGTAAAAGACTCTA 950
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU12890___yk 901 CCGCTTTACATCGTCCAAAAATCGTATGGAATTGAAAATAAAAGACTCTA 950
BSNT_02178___ 951 TAGAGACCAGCATATGTCATAA 972
||||||||||||||||||||||
BSU12890___yk 951 TAGAGACCAGCATATGTCATAA 972
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