Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02092 and BSU12330

See DNA alignment / Visit BSNT_02092 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:29
# Commandline: needle
#    -asequence pep-align/BSNT_02092___yjmD.1.22522.seq
#    -bsequence pep-align/BSU12330___yjmD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02092___yjmD-BSU12330___yjmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02092___yjmD-BSU12330___yjmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02092___yjmD
# 2: BSU12330___yjmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     337/339 (99.4%)
# Similarity:   339/339 (100.0%)
# Gaps:           0/339 ( 0.0%)
# Score: 1749.0
# 
#
#=======================================

BSNT_02092___      1 MKAIQVRKAYDLVTAEVKKPVLSKDDEVLVKVKRVGICGSDMHIYHGTNP     50
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj      1 MKAVQVRKAYDLVTAEVKKPVLSKDDEVLVKVKRVGICGSDMHIYHGTNP     50

BSNT_02092___     51 LATLPRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj     51 LATLPRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGR    100

BSNT_02092___    101 PNVCAKLSVFGVHEDGGMREYIVLPERQLHAVSKDLPWEEAVMAEPYTIG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    101 PNVCAKLSVFGVHEDGGMREYIVLPERQLHAVSKDLPWEEAVMAEPYTIG    150

BSNT_02092___    151 AQAVWRGQVEKGDTVLIQGAGPIGICVLKMAKLAGAAVMMTDLNNDRLAF    200
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
BSU12330___yj    151 AQAVWRGQVEKGDTVLIQGAGPIGICVLKMAKLAGAAVMMTDLNNERLAF    200

BSNT_02092___    201 AKENGADAVVNVQAEHVAERVLEWTGNEGANVVIDAVCLPETFALSIEAV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    201 AKENGADAVVNVQAEHVAERVLEWTGNEGANVVIDAVCLPETFALSIEAV    250

BSNT_02092___    251 SPAGHVVVLGFDERAAQISQLPITKKEVTITGSRLQTNQFPKVVELLNGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    251 SPAGHVVVLGFDERAAQISQLPITKKEVTITGSRLQTNQFPKVVELLNGG    300

BSNT_02092___    301 RLMHNGLVTHTFSVDDVHHAFQFIKEHPDQVRKAVITFD    339
                     |||||||||||||||||||||||||||||||||||||||
BSU12330___yj    301 RLMHNGLVTHTFSVDDVHHAFQFIKEHPDQVRKAVITFD    339


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