Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02092 and BSU12330

See Amino acid alignment / Visit BSNT_02092 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:29
# Commandline: needle
#    -asequence dna-align/BSNT_02092___yjmD.1.22522.seq
#    -bsequence dna-align/BSU12330___yjmD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02092___yjmD-BSU12330___yjmD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02092___yjmD-BSU12330___yjmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02092___yjmD
# 2: BSU12330___yjmD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity:    1011/1020 (99.1%)
# Similarity:  1011/1020 (99.1%)
# Gaps:           0/1020 ( 0.0%)
# Score: 5019.0
# 
#
#=======================================

BSNT_02092___      1 ATGAAAGCGATTCAAGTGCGAAAAGCGTATGATCTGGTGACAGCGGAGGT     50
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU12330___yj      1 ATGAAAGCGGTTCAAGTGCGAAAAGCGTATGATCTGGTGACAGCGGAGGT     50

BSNT_02092___     51 GAAGAAGCCAGTTCTTTCAAAGGATGATGAAGTGCTCGTGAAAGTCAAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj     51 GAAGAAGCCAGTTCTTTCAAAGGATGATGAAGTGCTCGTGAAAGTCAAGC    100

BSNT_02092___    101 GAGTCGGCATTTGCGGTTCAGACATGCACATTTATCATGGAACGAATCCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    101 GAGTCGGCATTTGCGGTTCAGACATGCACATTTATCATGGAACGAATCCG    150

BSNT_02092___    151 CTTGCTACCCTCCCGAGAGTTATCGGACACGAGGTAACGGGACAAGTGGA    200
                     ||.|||||||||||||||||.|||||||||||||||||||||||||||||
BSU12330___yj    151 CTCGCTACCCTCCCGAGAGTCATCGGACACGAGGTAACGGGACAAGTGGA    200

BSNT_02092___    201 GGCAGTTGGTGCGAATGTACAGAGCCTAAAACCCGGTGATCATGTGGTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    201 GGCAGTTGGTGCGAATGTACAGAGCCTAAAACCCGGTGATCATGTGGTGA    250

BSNT_02092___    251 TTGAGCCGATTTCTTATTGCGGATCGTGCTATGCCTGCCGCAAAGGGCGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    251 TTGAGCCGATTTCTTATTGCGGATCGTGCTATGCCTGCCGCAAAGGGCGG    300

BSNT_02092___    301 CCGAATGTTTGCGCCAAGCTTTCTGTATTTGGCGTACATGAGGACGGAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    301 CCGAATGTTTGCGCCAAGCTTTCTGTATTTGGCGTACATGAGGACGGAGG    350

BSNT_02092___    351 CATGCGGGAATATATTGTGCTTCCGGAAAGGCAGCTTCACGCGGTCTCAA    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU12330___yj    351 CATGCGGGAATATATTGTGCTTCCGGAAAGACAGCTTCACGCGGTCTCAA    400

BSNT_02092___    401 AGGACTTGCCTTGGGAGGAAGCAGTCATGGCCGAGCCTTATACGATAGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    401 AGGACTTGCCTTGGGAGGAAGCAGTCATGGCCGAGCCTTATACGATAGGC    450

BSNT_02092___    451 GCCCAGGCAGTGTGGAGAGGCCAGGTGGAAAAAGGTGATACCGTCCTGAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    451 GCCCAGGCAGTGTGGAGAGGCCAGGTGGAAAAAGGTGATACCGTCCTGAT    500

BSNT_02092___    501 CCAGGGAGCGGGACCCATCGGGATCTGTGTGTTGAAAATGGCAAAACTGG    550
                     ||||||||||||.||||||||||||||||||||.||||||||||||||||
BSU12330___yj    501 CCAGGGAGCGGGGCCCATCGGGATCTGTGTGTTAAAAATGGCAAAACTGG    550

BSNT_02092___    551 CGGGCGCTGCTGTCATGATGACTGACTTGAACAACGATCGGCTGGCATTT    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU12330___yj    551 CGGGCGCTGCTGTCATGATGACTGACTTGAACAACGAGCGGCTGGCATTT    600

BSNT_02092___    601 GCGAAAGAAAACGGCGCCGATGCTGTTGTAAATGTCCAAGCAGAACATGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    601 GCGAAAGAAAACGGCGCCGATGCTGTTGTAAATGTCCAAGCAGAACATGT    650

BSNT_02092___    651 TGCCGAGCGGGTCCTTGAATGGACTGGGAATGAAGGAGCAAACGTGGTCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    651 TGCCGAGCGGGTCCTTGAATGGACTGGGAATGAAGGAGCAAACGTGGTCA    700

BSNT_02092___    701 TTGATGCTGTTTGCCTGCCGGAGACTTTTGCACTTTCAATTGAGGCTGTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    701 TTGATGCTGTTTGCCTGCCGGAGACTTTTGCACTTTCAATTGAGGCTGTG    750

BSNT_02092___    751 TCACCGGCGGGACATGTGGTTGTGCTTGGATTTGATGAAAGAGCGGCTCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    751 TCACCGGCGGGACATGTGGTTGTGCTTGGATTTGATGAAAGAGCGGCTCA    800

BSNT_02092___    801 GATTTCTCAGCTGCCGATTACAAAAAAAGAAGTCACGATAACCGGATCCC    850
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12330___yj    801 GATTTCTCAGCTGCCAATTACAAAAAAAGAAGTCACGATAACCGGATCCC    850

BSNT_02092___    851 GATTGCAGACCAATCAGTTTCCAAAAGTGGTAGAGCTTTTGAATGGAGGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    851 GATTGCAGACCAATCAGTTTCCAAAAGTGGTAGAGCTTTTGAATGGAGGC    900

BSNT_02092___    901 CGGTTAATGCATAACGGGCTGGTGACCCATACATTTTCAGTTGATGACGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12330___yj    901 CGGTTAATGCATAACGGGCTGGTGACCCATACATTTTCAGTTGATGACGT    950

BSNT_02092___    951 TCATCATGCATTTCAGTTTATTAAGGAGCATCCAGATCAGGTGCGAAAAG   1000
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU12330___yj    951 TCATCATGCATTTCAGTTTATTAAGGAGCATCCAGATCAGGTGCGGAAAG   1000

BSNT_02092___   1001 CCGTCATCACGTTTGATTAA   1020
                     ||||||||||||||||||||
BSU12330___yj   1001 CCGTCATCACGTTTGATTAA   1020


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02092 and BSU12330

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
