Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02076 and BSU12240

See DNA alignment / Visit BSNT_02076 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:28
# Commandline: needle
#    -asequence pep-align/BSNT_02076___yjkA.1.22522.seq
#    -bsequence pep-align/BSU12240___yjkA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02076___yjkA-BSU12240___yjkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02076___yjkA-BSU12240___yjkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02076___yjkA
# 2: BSU12240___yjkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     250/250 (100.0%)
# Similarity:   250/250 (100.0%)
# Gaps:           0/250 ( 0.0%)
# Score: 1199.0
# 
#
#=======================================

BSNT_02076___      1 MDYLSLSLTMIFVLIALFLSKSFKAGVEKDMIIATIRAAVQLLIIGYVLS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj      1 MDYLSLSLTMIFVLIALFLSKSFKAGVEKDMIIATIRAAVQLLIIGYVLS     50

BSNT_02076___     51 LIFRGDHPVFILLMVLLMLAVAAQNVIKRKKNTIGSFWRVFAALAIVEIV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj     51 LIFRGDHPVFILLMVLLMLAVAAQNVIKRKKNTIGSFWRVFAALAIVEIV    100

BSNT_02076___    101 TQGILLSLHIIPLTARYVIPISGMVIGNSMVLSSLFLNRLNSEVGVRKEE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    101 TQGILLSLHIIPLTARYVIPISGMVIGNSMVLSSLFLNRLNSEVGVRKEE    150

BSNT_02076___    151 IQLILSLGGTPKQSIQRILTSAMKMSMIPTLESQKTLGLVQLPGMMTGQI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    151 IQLILSLGGTPKQSIQRILTSAMKMSMIPTLESQKTLGLVQLPGMMTGQI    200

BSNT_02076___    201 LAGADPIQAVRFQLLIVFTTMASAALTCVILSVLTYPSLFTVHQQLKQNE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    201 LAGADPIQAVRFQLLIVFTTMASAALTCVILSVLTYPSLFTVHQQLKQNE    250


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