Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02076 and BSU12240

See Amino acid alignment / Visit BSNT_02076 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:28
# Commandline: needle
#    -asequence dna-align/BSNT_02076___yjkA.1.22522.seq
#    -bsequence dna-align/BSU12240___yjkA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02076___yjkA-BSU12240___yjkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02076___yjkA-BSU12240___yjkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02076___yjkA
# 2: BSU12240___yjkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     752/753 (99.9%)
# Similarity:   752/753 (99.9%)
# Gaps:           0/753 ( 0.0%)
# Score: 3756.0
# 
#
#=======================================

BSNT_02076___      1 ATGGATTACCTTTCTCTCTCTTTAACGATGATCTTTGTTTTGATCGCCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj      1 ATGGATTACCTTTCTCTCTCTTTAACGATGATCTTTGTTTTGATCGCCTT     50

BSNT_02076___     51 GTTTTTATCAAAATCCTTTAAAGCCGGTGTAGAAAAAGACATGATCATCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj     51 GTTTTTATCAAAATCCTTTAAAGCCGGTGTAGAAAAAGACATGATCATCG    100

BSNT_02076___    101 CCACCATCCGGGCCGCGGTGCAGCTGCTTATCATCGGTTATGTTTTGTCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    101 CCACCATCCGGGCCGCGGTGCAGCTGCTTATCATCGGTTATGTTTTGTCG    150

BSNT_02076___    151 CTGATTTTTCGCGGAGACCACCCTGTTTTTATCCTGCTGATGGTGCTGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    151 CTGATTTTTCGCGGAGACCACCCTGTTTTTATCCTGCTGATGGTGCTGTT    200

BSNT_02076___    201 AATGCTCGCGGTGGCGGCGCAAAATGTCATCAAGCGAAAGAAAAATACTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    201 AATGCTCGCGGTGGCGGCGCAAAATGTCATCAAGCGAAAGAAAAATACTA    250

BSNT_02076___    251 TCGGTTCGTTTTGGAGGGTGTTTGCCGCGTTAGCAATCGTAGAAATTGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    251 TCGGTTCGTTTTGGAGGGTGTTTGCCGCGTTAGCAATCGTAGAAATTGTG    300

BSNT_02076___    301 ACGCAGGGAATTCTGCTGTCTCTTCATATCATTCCGCTTACGGCACGATA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    301 ACGCAGGGAATTCTGCTGTCTCTTCATATCATTCCGCTTACGGCACGATA    350

BSNT_02076___    351 TGTCATTCCGATCAGCGGGATGGTCATCGGAAATTCGATGGTGCTCTCAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    351 TGTCATTCCGATCAGCGGGATGGTCATCGGAAATTCGATGGTGCTCTCAA    400

BSNT_02076___    401 GTTTGTTTCTAAACCGGCTTAACTCAGAAGTCGGCGTTCGCAAAGAAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    401 GTTTGTTTCTAAACCGGCTTAACTCAGAAGTCGGCGTTCGCAAAGAAGAA    450

BSNT_02076___    451 ATTCAATTAATATTGTCACTTGGCGGCACACCGAAGCAATCCATACAGCG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    451 ATTCAATTAATATTGTCACTTGGCGGCACACCGAAGCAATCCATACAGCG    500

BSNT_02076___    501 CATTCTTACCTCAGCGATGAAAATGAGTATGATCCCGACGCTCGAAAGCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    501 CATTCTTACCTCAGCGATGAAAATGAGTATGATCCCGACGCTCGAAAGCC    550

BSNT_02076___    551 AGAAAACACTGGGTCTTGTCCAGCTTCCCGGCATGATGACTGGCCAGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    551 AGAAAACACTGGGTCTTGTCCAGCTTCCCGGCATGATGACTGGCCAGATT    600

BSNT_02076___    601 CTAGCCGGCGCGGACCCGATTCAGGCAGTACGCTTTCAACTCTTAATCGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    601 CTAGCCGGCGCGGACCCGATTCAGGCAGTACGCTTTCAACTCTTAATCGT    650

BSNT_02076___    651 GTTTACAACGATGGCCTCAGCCGCGCTGACTTGTGTAATCTTAAGCGTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12240___yj    651 GTTTACAACGATGGCCTCAGCCGCGCTGACTTGTGTAATCTTAAGCGTGC    700

BSNT_02076___    701 TGACATACCCATCATTATTCACCGTTCATCAGCAGCTGAAGCAGAATGAA    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU12240___yj    701 TGACATACCCATCATTATTCACCGTTCATCAGCAGCTGAAGCAAAATGAA    750

BSNT_02076___    751 TGA    753
                     |||
BSU12240___yj    751 TGA    753


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