Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02045 and BSU12070

See DNA alignment / Visit BSNT_02045 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:25
# Commandline: needle
#    -asequence pep-align/BSNT_02045___yjdJ.1.22522.seq
#    -bsequence pep-align/BSU12070___yjdJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02045___yjdJ-BSU12070___yjdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02045___yjdJ-BSU12070___yjdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02045___yjdJ
# 2: BSU12070___yjdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:     108/109 (99.1%)
# Similarity:   109/109 (100.0%)
# Gaps:           0/109 ( 0.0%)
# Score: 550.0
# 
#
#=======================================

BSNT_02045___      1 MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12070___yj      1 MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNG     50

BSNT_02045___     51 IDAVSSPKQISQLDFFIYSAKYYPVMSALMIISFLYVLAALFLLIYSVKC    100
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
BSU12070___yj     51 IDAVSSPKQISQLDFFIYSAKHYPVMSALMIISFLYVLAALFLLIYSVKC    100

BSNT_02045___    101 NKQEIHLDC    109
                     |||||||||
BSU12070___yj    101 NKQEIHLDC    109


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.