Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02045 and BSU12070

See Amino acid alignment / Visit BSNT_02045 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:25
# Commandline: needle
#    -asequence dna-align/BSNT_02045___yjdJ.1.22522.seq
#    -bsequence dna-align/BSU12070___yjdJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02045___yjdJ-BSU12070___yjdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02045___yjdJ-BSU12070___yjdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02045___yjdJ
# 2: BSU12070___yjdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     328/330 (99.4%)
# Similarity:   328/330 (99.4%)
# Gaps:           0/330 ( 0.0%)
# Score: 1632.0
# 
#
#=======================================

BSNT_02045___      1 GTGAAGGGAATATTTTTAGTTGTTCAGCTTGGATTTTCTATTATGGTATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12070___yj      1 GTGAAGGGAATATTTTTAGTTGTTCAGCTTGGATTTTCTATTATGGTATT     50

BSNT_02045___     51 TCTGTTTTTAGCTGCTGTTAATTGGTATCAAGGAAGCGAGCTTGTTTCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12070___yj     51 TCTGTTTTTAGCTGCTGTTAATTGGTATCAAGGAAGCGAGCTTGTTTCAG    100

BSNT_02045___    101 ATCGATTTGATTGGAACTATACTGCTAAACTCTCAAAACTGCTAAATGGA    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU12070___yj    101 ATCGATTTGATTGGAACTATACTGCTAAACTCTCAAAACTGCTTAATGGA    150

BSNT_02045___    151 ATTGATGCCGTCAGCAGCCCCAAACAAATTTCACAGCTTGATTTTTTCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12070___yj    151 ATTGATGCCGTCAGCAGCCCCAAACAAATTTCACAGCTTGATTTTTTCAT    200

BSNT_02045___    201 CTACTCCGCTAAATACTACCCTGTTATGAGTGCGTTAATGATCATCTCCT    250
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU12070___yj    201 CTACTCCGCTAAACACTACCCTGTTATGAGTGCGTTAATGATCATCTCCT    250

BSNT_02045___    251 TCTTATATGTTCTGGCCGCTCTTTTTTTACTTATATACTCAGTCAAATGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12070___yj    251 TCTTATATGTTCTGGCCGCTCTTTTTTTACTTATATACTCAGTCAAATGC    300

BSNT_02045___    301 AATAAGCAAGAGATTCATTTGGACTGCTGA    330
                     ||||||||||||||||||||||||||||||
BSU12070___yj    301 AATAAGCAAGAGATTCATTTGGACTGCTGA    330


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.