Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02042 and BSU12050

See DNA alignment / Visit BSNT_02042 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:25
# Commandline: needle
#    -asequence pep-align/BSNT_02042___yjdH.1.22522.seq
#    -bsequence pep-align/BSU12050___yjdH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02042___yjdH-BSU12050___yjdH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02042___yjdH-BSU12050___yjdH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02042___yjdH
# 2: BSU12050___yjdH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     130/139 (93.5%)
# Similarity:   131/139 (94.2%)
# Gaps:           8/139 ( 5.8%)
# Score: 710.0
# 
#
#=======================================

BSNT_02042___      1 MENKGVVALYHYFYGPALIPYFSHTHNPQRSPDFSERQRRREITLTVDGF     50
                             :|||||||||||||||||||||||||||||||||||||||||
BSU12050___yj      1 --------MYHYFYGPALIPYFSHTHNPQRSPDFSERQRRREITLTVDGF     42

BSNT_02042___     51 VPPSSTEDLGDGFYSYAWTNQQVINPGEYLVCHLEGRDINVINGGFTPRD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12050___yj     43 VPPSSTEDLGDGFYSYAWTNQQVINPGEYLVCHLEGRDINVINGGFTPRD     92

BSNT_02042___    101 TAPLYAVASFPRRRNQWVIIIHNPVQTQRAISLYLIAKR    139
                     |||||||||||||||||||||||||||||||||||||||
BSU12050___yj     93 TAPLYAVASFPRRRNQWVIIIHNPVQTQRAISLYLIAKR    131


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