Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02042 and BSU12050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:25
# Commandline: needle
# -asequence dna-align/BSNT_02042___yjdH.1.22522.seq
# -bsequence dna-align/BSU12050___yjdH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02042___yjdH-BSU12050___yjdH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02042___yjdH-BSU12050___yjdH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02042___yjdH
# 2: BSU12050___yjdH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 394/420 (93.8%)
# Similarity: 394/420 (93.8%)
# Gaps: 24/420 ( 5.7%)
# Score: 1962.0
#
#
#=======================================
BSNT_02042___ 1 ATGGAAAATAAAGGAGTGGTTGCTTTGTATCATTACTTTTATGGCCCTGC 50
||||||||||||||||||||||||||
BSU12050___yj 1 ------------------------TTGTATCATTACTTTTATGGCCCTGC 26
BSNT_02042___ 51 GTTAATTCCTTACTTTTCACATACTCATAACCCTCAAAGAAGTCCAGATT 100
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU12050___yj 27 GTTAATTCCTTACTTTTCACATACTCATAACCCTCAAAGAAGTCCAGACT 76
BSNT_02042___ 101 TTTCAGAAAGACAGCGAAGAAGAGAAATCACATTGACTGTAGATGGCTTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12050___yj 77 TTTCAGAAAGACAGCGAAGAAGAGAAATCACATTGACTGTAGATGGCTTT 126
BSNT_02042___ 151 GTCCCCCCATCTTCCACCGAAGATCTTGGAGACGGCTTTTATTCTTACGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12050___yj 127 GTCCCCCCATCTTCCACCGAAGATCTTGGAGACGGCTTTTATTCTTACGC 176
BSNT_02042___ 201 ATGGACGAACCAACAGGTCATCAATCCAGGTGAATACTTAGTTTGTCATC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12050___yj 177 ATGGACGAACCAACAGGTCATCAATCCAGGTGAATACTTAGTTTGTCATC 226
BSNT_02042___ 251 TTGAAGGAAGAGATATCAACGTGATAAATGGTGGGTTCACTCCGCGCGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12050___yj 227 TTGAAGGAAGAGATATCAACGTGATAAATGGTGGGTTCACTCCGCGCGAT 276
BSNT_02042___ 301 ACTGCTCCATTGTATGCGGTAGCAAGCTTTCCAAGACGAAGAAACCAATG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12050___yj 277 ACTGCTCCATTGTATGCGGTAGCAAGCTTTCCAAGACGAAGAAACCAATG 326
BSNT_02042___ 351 GGTCATTATCATTCATAATCCTGTTCAAACCCAAAGAGCCATATCGCTTT 400
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12050___yj 327 GGTCATTATCATTCATAATCCTGTGCAAACCCAAAGAGCCATATCGCTTT 376
BSNT_02042___ 401 ATTTGATTGCGAAAAGGTAG 420
||||||||||||||||||||
BSU12050___yj 377 ATTTGATTGCGAAAAGGTAG 396
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