Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01978 and BSU11850

See DNA alignment / Visit BSNT_01978 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:22
# Commandline: needle
#    -asequence pep-align/BSNT_01978___yjcG.1.22522.seq
#    -bsequence pep-align/BSU11850___yjcG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01978___yjcG-BSU11850___yjcG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01978___yjcG-BSU11850___yjcG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01978___yjcG
# 2: BSU11850___yjcG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity:     171/171 (100.0%)
# Similarity:   171/171 (100.0%)
# Gaps:           0/171 ( 0.0%)
# Score: 889.0
# 
#
#=======================================

BSNT_01978___      1 MKYGIVLFPSKKLQDLANSYRKRYDPSYSLIPPHLTLRASFECAEEKADQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj      1 MKYGIVLFPSKKLQDLANSYRKRYDPSYSLIPPHLTLRASFECAEEKADQ     50

BSNT_01978___     51 LVSHLRNIAKESHPLVLKMTKYSSFAPVNNVIYIKAEPTEELKTLNEKLY    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj     51 LVSHLRNIAKESHPLVLKMTKYSSFAPVNNVIYIKAEPTEELKTLNEKLY    100

BSNT_01978___    101 TGVLAGEQEYNFVPHVTVGQNLSDDEHSDVLGQLKMQEVSHEEIVDRFHL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    101 TGVLAGEQEYNFVPHVTVGQNLSDDEHSDVLGQLKMQEVSHEEIVDRFHL    150

BSNT_01978___    151 LYQLENGSWTVYETFLLGRGE    171
                     |||||||||||||||||||||
BSU11850___yj    151 LYQLENGSWTVYETFLLGRGE    171


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.