Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01978 and BSU11850

See Amino acid alignment / Visit BSNT_01978 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:22
# Commandline: needle
#    -asequence dna-align/BSNT_01978___yjcG.1.22522.seq
#    -bsequence dna-align/BSU11850___yjcG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01978___yjcG-BSU11850___yjcG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01978___yjcG-BSU11850___yjcG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01978___yjcG
# 2: BSU11850___yjcG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 516
# Identity:     512/516 (99.2%)
# Similarity:   512/516 (99.2%)
# Gaps:           0/516 ( 0.0%)
# Score: 2544.0
# 
#
#=======================================

BSNT_01978___      1 ATGAAATACGGAATCGTTTTATTTCCATCAAAAAAGCTTCAAGACCTTGC     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU11850___yj      1 ATGAAATACGGAATCGTTTTATTTCCATCAAAAAAGCTCCAAGACCTTGC     50

BSNT_01978___     51 AAACTCTTACAGAAAGCGCTATGACCCAAGCTACTCTCTAATCCCGCCTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj     51 AAACTCTTACAGAAAGCGCTATGACCCAAGCTACTCTCTAATCCCGCCTC    100

BSNT_01978___    101 ATTTGACGCTGAGAGCATCCTTTGAATGCGCGGAGGAGAAAGCGGATCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    101 ATTTGACGCTGAGAGCATCCTTTGAATGCGCGGAGGAGAAAGCGGATCAG    150

BSNT_01978___    151 CTCGTATCACATTTAAGAAACATCGCAAAAGAGTCCCACCCACTCGTTCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    151 CTCGTATCACATTTAAGAAACATCGCAAAAGAGTCCCACCCACTCGTTCT    200

BSNT_01978___    201 CAAAATGACAAAATACAGCTCATTTGCGCCTGTCAATAATGTCATTTACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    201 CAAAATGACAAAATACAGCTCATTTGCGCCTGTCAATAATGTCATTTACA    250

BSNT_01978___    251 TCAAAGCAGAACCGACGGAAGAGTTAAAAACACTCAATGAAAAGCTATAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    251 TCAAAGCAGAACCGACGGAAGAGTTAAAAACACTCAATGAAAAGCTATAC    300

BSNT_01978___    301 ACCGGTGTGTTGGCAGGAGAACAGGAATATAATTTTGTTCCGCATGTGAC    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU11850___yj    301 ACCGGTGTGTTGGCAGGAGAACAGGAATATAATTTCGTTCCGCATGTGAC    350

BSNT_01978___    351 GGTCGGCCAAAATCTTTCCGACGATGAGCATTCAGATGTGCTGGGACAAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    351 GGTCGGCCAAAATCTTTCCGACGATGAGCATTCAGATGTGCTGGGACAAT    400

BSNT_01978___    401 TAAAAATGCAGGAAGTGTCGCATGAAGAAATCGTTGACCGTTTCCACTTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    401 TAAAAATGCAGGAAGTGTCGCATGAAGAAATCGTTGACCGTTTCCACTTG    450

BSNT_01978___    451 CTTTACCAGCTGGAAAACGGATCGTGGACAGTATATGAAACCTTCTTGCT    500
                     ||.||||||.||||||||||||||||||||||||||||||||||||||||
BSU11850___yj    451 CTCTACCAGTTGGAAAACGGATCGTGGACAGTATATGAAACCTTCTTGCT    500

BSNT_01978___    501 AGGCAGAGGAGAATAA    516
                     ||||||||||||||||
BSU11850___yj    501 AGGCAGAGGAGAATAA    516


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