Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01967 and BSU11780

See DNA alignment / Visit BSNT_01967 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:20
# Commandline: needle
#    -asequence pep-align/BSNT_01967___cotV.1.22522.seq
#    -bsequence pep-align/BSU11780___cotV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01967___cotV-BSU11780___cotV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01967___cotV-BSU11780___cotV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01967___cotV
# 2: BSU11780___cotV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      58/128 (45.3%)
# Similarity:    90/128 (70.3%)
# Gaps:           0/128 ( 0.0%)
# Score: 281.0
# 
#
#=======================================

BSNT_01967___      1 MSVQENVDTLYSKMFKELAEEHDNYIEIIDSEKITIHKSDTTFALSLQSA     50
                     ||.:|.|::|:..:|::|:.|.:..||:||.|.|||..|..|.|||:|:.
BSU11780___co      1 MSFEEKVESLHPAIFEQLSSEFEQQIEVIDCENITIDTSHITAALSIQAF     50

BSNT_01967___     51 VSALITVTTQLLISDSDIADIVASDLIARSTAHSRKKVKIKIINCYNITI    100
                     |:.:|.|.|||:|:|.|:||.|||:::...::..:|:..|||||..||.|
BSU11780___co     51 VTTMIIVATQLVIADEDLADAVASEILILDSSQIKKRTIIKIINSRNIKI    100

BSNT_01967___    101 TLSATDIMASVQLLTQTLIALITEADIL    128
                     ||||.:|:..||:|.|.|.::::|.|:|
BSU11780___co    101 TLSADEIITFVQILLQVLNSILSELDVL    128


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