Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01941 and BSU11600

See DNA alignment / Visit BSNT_01941 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence pep-align/BSNT_01941___yjbM.1.22522.seq
#    -bsequence pep-align/BSU11600___yjbM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01941___yjbM-BSU11600___yjbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01941___yjbM-BSU11600___yjbM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: BSU11600___yjbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity:     211/212 (99.5%)
# Similarity:   211/212 (99.5%)
# Gaps:           1/212 ( 0.5%)
# Score: 1072.0
# 
#
#=======================================

BSNT_01941___      1 MMDDKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKP     50
                      |||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj      1 -MDDKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKP     49

BSNT_01941___     51 VASILEKARRKSIPLHEIETMQDIAGLRIMCQFVDDIQIVKEMLFARKDF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj     50 VASILEKARRKSIPLHEIETMQDIAGLRIMCQFVDDIQIVKEMLFARKDF     99

BSNT_01941___    101 TVVDQRDYIAEHKESGYRSYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNF    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    100 TVVDQRDYIAEHKESGYRSYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNF    149

BSNT_01941___    151 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEVQEAQA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    150 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEVQEAQA    199

BSNT_01941___    201 AFSRKKKGSEQQ    212
                     ||||||||||||
BSU11600___yj    200 AFSRKKKGSEQQ    211


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.