Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01941 and BSU11600

See Amino acid alignment / Visit BSNT_01941 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence dna-align/BSNT_01941___yjbM.1.22522.seq
#    -bsequence dna-align/BSU11600___yjbM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01941___yjbM-BSU11600___yjbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01941___yjbM-BSU11600___yjbM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: BSU11600___yjbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity:     634/639 (99.2%)
# Similarity:   634/639 (99.2%)
# Gaps:           3/639 ( 0.5%)
# Score: 3162.0
# 
#
#=======================================

BSNT_01941___      1 ATGATGGATGACAAACAATGGGAGCGTTTTTTAGTGCCGTACCGCCAGGC     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj      1 ---ATGGATGACAAACAATGGGAGCGTTTTTTAGTGCCGTACCGCCAGGC     47

BSNT_01941___     51 TGTCGAAGAGTTGAAAGTGAAGCTCAAGGGGATCCGCACACTATATGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj     48 TGTCGAAGAGTTGAAAGTGAAGCTCAAGGGGATCCGCACACTATATGAAT     97

BSNT_01941___    101 ACGAGGACGACCATTCACCGATCGAATTTGTGACCGGACGCGTCAAGCCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj     98 ACGAGGACGACCATTCACCGATCGAATTTGTGACCGGACGCGTCAAGCCT    147

BSNT_01941___    151 GTGGCGAGCATTCTTGAAAAAGCGAGACGGAAAAGCATACCGCTGCATGA    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU11600___yj    148 GTGGCGAGCATACTTGAAAAAGCGAGACGGAAAAGCATACCGCTGCATGA    197

BSNT_01941___    201 AATTGAAACCATGCAGGACATTGCTGGCCTTAGAATCATGTGCCAATTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    198 AATTGAAACCATGCAGGACATTGCTGGCCTTAGAATCATGTGCCAATTTG    247

BSNT_01941___    251 TCGATGACATCCAAATCGTAAAAGAGATGCTTTTTGCCAGAAAAGATTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    248 TCGATGACATCCAAATCGTAAAAGAGATGCTTTTTGCCAGAAAAGATTTC    297

BSNT_01941___    301 ACCGTTGTGGATCAGAGGGATTATATTGCGGAACATAAAGAGAGCGGATA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    298 ACCGTTGTGGATCAGAGGGATTATATTGCGGAACATAAAGAGAGCGGATA    347

BSNT_01941___    351 CCGGTCATACCATCTTGTTGTGCTGTACCCTTTGCAGACGGTATCCGGAG    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    348 CCGATCATACCATCTTGTTGTGCTGTACCCTTTGCAGACGGTATCCGGAG    397

BSNT_01941___    401 AAAAGCATGTTCTCGTAGAAATACAGATCCGTACACTGGCGATGAATTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    398 AAAAGCATGTTCTCGTAGAAATACAGATCCGTACACTGGCGATGAATTTT    447

BSNT_01941___    451 TGGGCGACCATTGAACATTCATTGAATTATAAATACAGCGGAAACATTCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    448 TGGGCGACCATTGAACATTCATTGAATTATAAATACAGCGGAAACATTCC    497

BSNT_01941___    501 TGAAAAAGTAAAACTAAGGCTTCAGCGCGCTTCTGAAGCGGCTTCCCGGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    498 TGAAAAAGTAAAACTAAGGCTTCAGCGCGCTTCTGAAGCGGCTTCCCGGC    547

BSNT_01941___    551 TTGATGAAGAGATGTCGGAGATCAGGGGTGAAGTACAGGAAGCTCAAGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11600___yj    548 TTGATGAAGAGATGTCGGAGATCAGGGGTGAAGTACAGGAAGCTCAAGCT    597

BSNT_01941___    601 GCCTTTTCAAGAAAGAAAAAAGGAAGCGAGCAACAATAG    639
                     |||||||||||||||||||||||||||||||||||||||
BSU11600___yj    598 GCCTTTTCAAGAAAGAAAAAAGGAAGCGAGCAACAATAG    636


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