Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01911 and BSU11420

See DNA alignment / Visit BSNT_01911 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:15
# Commandline: needle
#    -asequence pep-align/BSNT_01911___trpS.1.22522.seq
#    -bsequence pep-align/BSU11420___trpS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01911___trpS-BSU11420___trpS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01911___trpS-BSU11420___trpS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: BSU11420___trpS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     330/345 (95.7%)
# Similarity:   330/345 (95.7%)
# Gaps:          15/345 ( 4.3%)
# Score: 1683.0
# 
#
#=======================================

BSNT_01911___      1 MSLFYYVLRNEVDVFMKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYN     50
                                    |||||||||||||||||||||||||||||||||||
BSU11420___tr      1 ---------------MKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYN     35

BSNT_01911___     51 SYFCIVDQHAITVPQDRLELRKNIRNLAALYLAVGLDPEKATLFIQSEVP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr     36 SYFCIVDQHAITVPQDRLELRKNIRNLAALYLAVGLDPEKATLFIQSEVP     85

BSNT_01911___    101 AHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr     86 AHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL    135

BSNT_01911___    151 LYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVGARIM    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    136 LYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVGARIM    185

BSNT_01911___    201 SLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKEN    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    186 SLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKEN    235

BSNT_01911___    251 KPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQ    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    236 KPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQ    285

BSNT_01911___    301 DRYYELIESEELDRILDEGAERANRTANKMLKKMENAMGLGRKRR    345
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    286 DRYYELIESEELDRILDEGAERANRTANKMLKKMENAMGLGRKRR    330


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