Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01911 and BSU11420

See Amino acid alignment / Visit BSNT_01911 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:15
# Commandline: needle
#    -asequence dna-align/BSNT_01911___trpS.1.22522.seq
#    -bsequence dna-align/BSU11420___trpS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01911___trpS-BSU11420___trpS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01911___trpS-BSU11420___trpS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: BSU11420___trpS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1038
# Identity:     978/1038 (94.2%)
# Similarity:   978/1038 (94.2%)
# Gaps:          45/1038 ( 4.3%)
# Score: 4830.0
# 
#
#=======================================

BSNT_01911___      1 ATGAGCCTTTTTTATTATGTTTTAAGAAATGAGGTTGATGTTTTCATGAA     50
                                                                  |||||
BSU11420___tr      1 ---------------------------------------------ATGAA      5

BSNT_01911___     51 ACAAACGATTTTTTCAGGCATTCAGCCAAGCGGCTCAGTGACGCTTGGCA    100
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU11420___tr      6 ACAAACGATTTTTTCAGGCATTCAGCCAAGCGGCTCAGTGACGCTCGGCA     55

BSNT_01911___    101 ACTATATCGGTGCAATGAAGCAGTTTGTCGAACTGCAGCATGATTATAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr     56 ACTATATCGGTGCAATGAAGCAGTTTGTCGAACTGCAGCATGATTATAAC    105

BSNT_01911___    151 AGCTATTTTTGCATCGTGGACCAGCATGCGATAACTGTTCCTCAAGACCG    200
                     |||||||||||||||||.||.|||||||||||||||||||||||||||||
BSU11420___tr    106 AGCTATTTTTGCATCGTCGATCAGCATGCGATAACTGTTCCTCAAGACCG    155

BSNT_01911___    201 GCTTGAGCTTAGAAAGAATATCCGCAATCTCGCGGCGCTTTACTTAGCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    156 GCTTGAGCTTAGAAAGAATATCCGCAATCTCGCGGCGCTTTACTTAGCTG    205

BSNT_01911___    251 TCGGACTTGATCCAGAAAAAGCAACATTGTTTATTCAGTCAGAGGTCCCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    206 TCGGACTTGATCCAGAAAAAGCAACATTGTTTATTCAGTCAGAGGTCCCC    255

BSNT_01911___    301 GCGCATGCGCAGGCCGGATGGATGATGCAGTGTGTCGCTTATATCGGCGA    350
                     ||.|||||||||||||||||||||||||||||||||||.|||||||||||
BSU11420___tr    256 GCACATGCGCAGGCCGGATGGATGATGCAGTGTGTCGCCTATATCGGCGA    305

BSNT_01911___    351 GCTTGAGCGGATGACTCAATTTAAGGACAAATCCAAAGGCAATGAAGCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    306 GCTTGAGCGGATGACTCAATTTAAGGACAAATCCAAAGGCAATGAAGCTG    355

BSNT_01911___    401 TCGTCTCCGGCCTGTTAACATATCCGCCGCTGATGGCCGCTGATATTCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    356 TCGTCTCCGGCCTGTTAACATATCCGCCGCTGATGGCCGCTGATATTCTG    405

BSNT_01911___    451 CTGTACGGAACGGATCTTGTGCCTGTCGGCGAGGATCAAAAGCAGCACCT    500
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU11420___tr    406 CTGTACGGAACGGATCTTGTACCTGTCGGCGAGGATCAAAAGCAGCACCT    455

BSNT_01911___    501 TGAGCTGACGCGGAATCTTGCAGAACGCTTCAACAAAAAATACAACGACA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    456 TGAGCTGACGCGGAATCTTGCAGAACGCTTCAACAAAAAATACAACGACA    505

BSNT_01911___    551 TCTTTACGATTCCGGAAGTGAAAATTCCAAAAGTCGGTGCACGCATCATG    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU11420___tr    506 TCTTTACGATTCCGGAAGTGAAAATTCCAAAAGTCGGTGCACGTATCATG    555

BSNT_01911___    601 TCTCTGAATGATCCGCTGAAGAAAATGAGCAAATCTGATCCGAATCAGAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    556 TCTCTGAATGATCCGCTGAAGAAAATGAGCAAATCTGATCCGAATCAGAA    605

BSNT_01911___    651 AGCTTATATTACATTGCTGGATGAGCCGAAGCAGCTTGAAAAGAAAATCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    606 AGCTTATATTACATTGCTGGATGAGCCGAAGCAGCTTGAAAAGAAAATCA    655

BSNT_01911___    701 AAAGCGCTGTAACTGATTCTGAAGGCATTGTCAAATTTGATAAGGAAAAC    750
                     |||||||.|||||.||||||||||||||||||||||||||||||||||||
BSU11420___tr    656 AAAGCGCAGTAACGGATTCTGAAGGCATTGTCAAATTTGATAAGGAAAAC    705

BSNT_01911___    751 AAACCGGGCGTTTCAAACCTTCTTACAATTTATTCAATTCTCGGCAATAC    800
                     ||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU11420___tr    706 AAACCGGGCGTTTCCAACCTTCTTACAATTTATTCAATCCTCGGCAATAC    755

BSNT_01911___    801 GACAATTGAAGAGCTTGAAGCAAAGTACGAAGGAAAAGGCTACGGCGAGT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11420___tr    756 GACAATTGAAGAGCTTGAAGCAAAGTACGAAGGAAAAGGCTACGGCGAGT    805

BSNT_01911___    851 TTAAAGGTGATTTGGCAGAAGTCGTGGTGAACGCATTAAAACCGATCCAG    900
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU11420___tr    806 TTAAAGGTGATTTGGCAGAAGTCGTAGTGAACGCATTAAAACCGATCCAG    855

BSNT_01911___    901 GACCGCTATTACGAGCTGATAGAATCTGAGGAATTAGACCGGATTCTTGA    950
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU11420___tr    856 GACCGCTATTACGAGCTGATAGAATCTGAAGAATTAGACCGGATTCTTGA    905

BSNT_01911___    951 TGAAGGCGCGGAACGGGCGAACCGGACAGCAAACAAAATGCTGAAAAAAA   1000
                     |||||||||||||||.|||||.||||||||||||||||||||||||||||
BSU11420___tr    906 TGAAGGCGCGGAACGAGCGAATCGGACAGCAAACAAAATGCTGAAAAAAA    955

BSNT_01911___   1001 TGGAGAATGCCATGGGTCTTGGAAGAAAAAGACGCTAA   1038
                     ||||||||||||||||||||||||||||||||||||||
BSU11420___tr    956 TGGAGAATGCCATGGGTCTTGGAAGAAAAAGACGCTAA    993


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