Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01877 and BSU11180

See DNA alignment / Visit BSNT_01877 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:10
# Commandline: needle
#    -asequence pep-align/BSNT_01877.1.22522.seq
#    -bsequence pep-align/BSU11180___yitZ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01877-BSU11180___yitZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01877-BSU11180___yitZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01877
# 2: BSU11180___yitZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     100/179 (55.9%)
# Similarity:   102/179 (57.0%)
# Gaps:          76/179 (42.5%)
# Score: 500.5
# 
#
#=======================================

BSNT_01877         1 MGKNKLKWLTLSQSSVFFASSLIFPFYILFVKNIGSSYTQFGFSYGLFGL     50
                                    :||||||||||||||||||||||||||||||||||
BSU11180___yi      1 ---------------MFFASSLIFPFYILFVKNIGSSYTQFGFSYGLFGL     35

BSNT_01877        51 SGALIYPLLGRLSERFDSRYFLLLNSWGMAVLLLYVPHIGSVVQVYIVQV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11180___yi     36 SGALIYPLLGRLSERFDSRYFLLLNSWGMAVLLLYVPHIGSVVQVYIVQV     85

BSNT_01877       101 LLGLFGAMQKHGEK--------SADR------------------------    118
                     ||||||||||||||        |.:|                        
BSU11180___yi     86 LLGLFGAMQKHGEKVLIANFTDSGERGKKIGNYHFWTAVFSAAAIMLGGF    135

BSNT_01877       118 -----------------------------    118
                                                  
BSU11180___yi    136 LADFFTVQMIFYASSILYFLSGLMMMKTG    164


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