Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01877 and BSU11180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:10
# Commandline: needle
# -asequence dna-align/BSNT_01877.1.22522.seq
# -bsequence dna-align/BSU11180___yitZ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01877-BSU11180___yitZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01877-BSU11180___yitZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01877
# 2: BSU11180___yitZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 309/541 (57.1%)
# Similarity: 309/541 (57.1%)
# Gaps: 230/541 (42.5%)
# Score: 1527.0
#
#
#=======================================
BSNT_01877 1 ATGGGGAAAAACAAATTAAAATGGCTGACATTATCACAAAGCAGCGTGTT 50
|||||
BSU11180___yi 1 ---------------------------------------------GTGTT 5
BSNT_01877 51 TTTCGCAAGCAGCTTAATCTTTCCGTTTTATATTCTGTTTGTGAAAAATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11180___yi 6 TTTCGCAAGCAGCTTAATCTTTCCGTTTTATATTCTGTTTGTGAAAAATA 55
BSNT_01877 101 TCGGCTCAAGCTACACACAGTTCGGTTTTTCCTACGGATTGTTCGGGTTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11180___yi 56 TCGGCTCAAGCTACACACAGTTCGGTTTTTCCTACGGATTGTTCGGGTTG 105
BSNT_01877 151 AGCGGAGCGCTCATTTACCCGCTCCTCGGACGGCTGTCTGAAAGGTTTGA 200
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU11180___yi 106 AGCGGAGCGCTTATTTACCCGCTCCTCGGACGGCTGTCTGAAAGGTTTGA 155
BSNT_01877 201 CAGCCGTTATTTTCTGCTTCTGAACTCGTGGGGGATGGCTGTTCTGCTTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11180___yi 156 CAGCCGTTATTTTCTGCTTCTGAACTCGTGGGGGATGGCTGTTCTGCTTT 205
BSNT_01877 251 TATATGTCCCGCATATTGGAAGCGTCGTTCAAGTGTATATCGTCCAAGTG 300
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU11180___yi 206 TATATGTCCCGCATATCGGAAGCGTCGTTCAAGTGTATATCGTCCAAGTG 255
BSNT_01877 301 CTGTTAGGGCTCTTTGGAGCGATGCAAAAGCATGGAGAAAAAAGTGCTGA 350
||||||||||||||||||||||||||||||||||||| ||||||||||||
BSU11180___yi 256 CTGTTAGGGCTCTTTGGAGCGATGCAAAAGCATGGAG-AAAAAGTGCTGA 304
BSNT_01877 351 TCGCTAA------------------------------------------- 357
|||||||
BSU11180___yi 305 TCGCTAATTTTACAGACAGTGGAGAGCGTGGAAAGAAGATCGGGAATTAC 354
BSNT_01877 357 -------------------------------------------------- 357
BSU11180___yi 355 CATTTTTGGACAGCTGTCTTTTCAGCAGCAGCCATTATGCTCGGGGGCTT 404
BSNT_01877 357 -------------------------------------------------- 357
BSU11180___yi 405 TCTCGCTGACTTTTTCACAGTGCAAATGATTTTTTATGCAAGCTCTATTC 454
BSNT_01877 357 ----------------------------------------- 357
BSU11180___yi 455 TATATTTTTTGAGTGGATTGATGATGATGAAAACAGGCTGA 495
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