Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01864 and BSU11090

See DNA alignment / Visit BSNT_01864 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:09
# Commandline: needle
#    -asequence pep-align/BSNT_01864.1.22522.seq
#    -bsequence pep-align/BSU11090___yitR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01864-BSU11090___yitR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01864-BSU11090___yitR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01864
# 2: BSU11090___yitR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 97
# Identity:      78/97 (80.4%)
# Similarity:    90/97 (92.8%)
# Gaps:           1/97 ( 1.0%)
# Score: 408.0
# 
#
#=======================================

BSNT_01864         1 MEIRIDFLIIFIALLFFWVAYMVGIKKQTWILSGFRESQIRDKDRLARIA     50
                     |||.|::|:|.||||||.|||.||||||||:|:||.|::|||||||||||
BSU11090___yi      1 MEISINYLLIVIALLFFVVAYFVGIKKQTWMLAGFNEARIRDKDRLARIA     50

BSNT_01864        51 GYFFLNSGIFILLNGFISFQGQDQLIPPMIVAYGAGVIIYVNKKLI-     96
                     ||||||||:|||||.|||||||:|||||:|:||||||||||||||: 
BSU11090___yi     51 GYFFLNSGLFILLNSFISFQGQEQLIPPLILAYGAGVIIYVNKKLVE     97


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