Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01864 and BSU11090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:09
# Commandline: needle
# -asequence dna-align/BSNT_01864.1.22522.seq
# -bsequence dna-align/BSU11090___yitR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01864-BSU11090___yitR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01864-BSU11090___yitR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01864
# 2: BSU11090___yitR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity: 217/302 (71.9%)
# Similarity: 217/302 (71.9%)
# Gaps: 19/302 ( 6.3%)
# Score: 756.0
#
#
#=======================================
BSNT_01864 1 GTGGAAATACGTATCGATTTTTTAATAATCTTTATTGCGCTGCTTTTCTT 50
.|||||||..|.|||.|||.|.||.||||..|.||.|||||..|.|||||
BSU11090___yi 1 ATGGAAATCAGCATCAATTATCTATTAATTGTCATCGCGCTTTTATTCTT 50
BSNT_01864 51 TTGGGTTGCTTATATGGTTGGAATAAAAAAGCAAACATGGATACTTTCC- 99
|..||||||.|||.|.||.|||||.|||||.|||||.||||| .||..|
BSU11090___yi 51 TGTGGTTGCCTATTTTGTCGGAATCAAAAAACAAACCTGGAT-GTTGGCT 99
BSNT_01864 100 -GGTTT--CCGGGAGTCTCAAATACGTGACAAGGATCGTCTGGCTAGAAT 146
||||| | |||.|.|..|||||.||.||.|||||.|||||.|||||
BSU11090___yi 100 GGGTTTAAC---GAGGCGCGTATACGGGATAAAGATCGGCTGGCCAGAAT 146
BSNT_01864 147 TGCGGGATACTTTTTTCTCAATTCGGGAATATTTATTCTTT----TAAAT 192
.||.||.||||||||..|.|||||.|| |||.|||.|| |.|||
BSU11090___yi 147 AGCAGGCTACTTTTTCTTGAATTCCGG----TTTGTTCATTTTGCTGAAT 192
BSNT_01864 193 GGTTTTATTTCATTTCAGGGACAAGATCAGCTGATACCTCCAATGATAGT 242
.|||||||.||||||||.||.||.||.|||||.||||||||..|.|||.|
BSU11090___yi 193 AGTTTTATCTCATTTCAAGGTCAGGAGCAGCTCATACCTCCGCTTATACT 242
BSNT_01864 243 GGCATACGGTGCCGGAGTTATCATTTATGTAAATAAAAAATTAATATAA- 291
||||||.||.||.||.|||||.||||||||.||||||||||||.||.|.
BSU11090___yi 243 GGCATATGGAGCAGGGGTTATTATTTATGTCAATAAAAAATTAGTAGAGT 292
BSNT_01864 291 -- 291
BSU11090___yi 293 AG 294
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