Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06189 and BSU11055

See DNA alignment / Visit BSNT_06189 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:48
# Commandline: needle
#    -asequence pep-align/BSNT_06189.1.22522.seq
#    -bsequence pep-align/BSU11055___yitO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06189-BSU11055___yitO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06189-BSU11055___yitO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06189
# 2: BSU11055___yitO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     161/322 (50.0%)
# Similarity:   216/322 (67.1%)
# Gaps:          18/322 ( 5.6%)
# Score: 842.5
# 
#
#=======================================

BSNT_06189         1 MFETLNIKIYKWANDNVPWTNVYGLARSIMALSTALTLALNDSSIFFRPG     50
                     |.|.:...|.:|...| ||||||||||||:|||:.|||.:|..|:..:|.
BSU11055___yi      1 MLENIKQTITRWDERN-PWTNVYGLARSIIALSSLLTLLINHPSLIMKPA     49

BSNT_06189        51 AG-QETPYCNGTYSIFCTVPNNHIYLNLIRWICVILLLVVVSGWRPRLTG     99
                     :| ...|.|....|:||...||::.|||.||:|:.:|::||.|||||:||
BSU11055___yi     50 SGISSYPACKMNLSLFCLGENNYMMLNLFRWVCIAILVLVVIGWRPRITG     99

BSNT_06189       100 IIHWWISYSLQVSAMTIDGGEQVSAVFTLLLLPITLTDSRKWHWESIKTG    149
                     ::||::|||||.|.:.||||||.:||.|.|||||||||.|||||     .
BSU11055___yi    100 VLHWYVSYSLQSSLIVIDGGEQAAAVMTFLLLPITLTDPRKWHW-----S    144

BSNT_06189       150 TDLINKKDLYFRVIALTTFVFIRIQIAILYFNSATAKLADQDWLNGTAVY    199
                     |..|..|....::.|..::..||||:|:|||:|..|||:.|:|::|||||
BSU11055___yi    145 TRPIEGKRTLGKITAFISYFVIRIQVAVLYFHSTVAKLSQQEWVDGTAVY    194

BSNT_06189       200 YYAQDPMLGFPPLLHTLFNDFLSSPLVVIPTWGTLIIQLLLFAFLFSPKS    249
                     |:||:..:||......|....::||.|||||||||::|:::||.||:||.
BSU11055___yi    195 YFAQEKTIGFNGFFQALTKPIVTSPFVVIPTWGTLLVQIVIFAALFAPKK    244

BSNT_06189       250 YRKYMFIIAILMHEIFAVMFGLISFSMIMLGILILYLRPLEKQFHFSLGK    299
                     :.:.:.|||:.||||||||.||||||:||.|||||||.|::....|:   
BSU11055___yi    245 HWRLILIIAVFMHEIFAVMLGLISFSIIMAGILILYLTPIDSTIQFT---    291

BSNT_06189       300 RFYISHLFM----KRGDAGKSL    317
                       ||..|..    |:|:...  
BSU11055___yi    292 --YIRRLLWNKKHKKGEVSV--    309


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