Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06188 and BSU11040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence pep-align/BSNT_06188.1.22522.seq
# -bsequence pep-align/BSU11040___yitM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06188-BSU11040___yitM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06188-BSU11040___yitM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06188
# 2: BSU11040___yitM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 64/209 (30.6%)
# Similarity: 107/209 (51.2%)
# Gaps: 22/209 (10.5%)
# Score: 257.5
#
#
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BSNT_06188 1 MDMRLAAQDLKLKLVYLMLIVLVVSIF--SGATPITQAKNLHKYSGEEIF 48
:|...:..:.:|||.::| .....:.|||.| :|||||||
BSU11040___yi 1 ---------MKKAFLVFLSVVLVTTVFLVKQQESVAQAKQL-EYSGEEIF 40
BSNT_06188 49 AGIVFGQGEISKKFPEIWNTNDYNVRNSDKSKELTQLLISEMKKIDPQYF 98
.|.||.|||:.|:.||::|....:..|:.::|.....:::::||.|..:|
BSU11040___yi 41 KGFVFAQGEVGKQLPEVFNKAMTDKLNTKQAKAFANQVVADIKKEDADFF 90
BSNT_06188 99 NDLKKSVYEKDLKLIDEEFSKGGDLLKEAAE--KVNMGSSEHADLVSGKC 146
::|||:||.||...:||...|.|.:::|..| |....|.:....|..:.
BSU11040___yi 91 DNLKKAVYSKDALKVDELLKKAGQIVEEKVEAAKEIAASKDDTSRVQAEL 140
BSNT_06188 147 VETLGAA---IFVLVLAAGGAVDYLYVYNATKFWGITSNDKESKLATEMF 193
|.|:..| .:|..:||.||: :.:..|.....|..:|...: ||.
BSU11040___yi 141 VNTVDTANYFYYVSYVAAAGAL--ILIILAIDITPIAISDNVDR---EMA 185
BSNT_06188 194 VKDVADKLN 202
::.:.|:||
BSU11040___yi 186 IRTLVDELN 194
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