Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01862 and BSU11030

See DNA alignment / Visit BSNT_01862 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:09
# Commandline: needle
#    -asequence pep-align/BSNT_01862___yitL.1.22522.seq
#    -bsequence pep-align/BSU11030___yitL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01862___yitL-BSU11030___yitL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01862___yitL-BSU11030___yitL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: BSU11030___yitL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     279/298 (93.6%)
# Similarity:   281/298 (94.3%)
# Gaps:          16/298 ( 5.4%)
# Score: 1460.0
# 
#
#=======================================

BSNT_01862___      1 ----------------MRPGQQLTLSIDHQTDFGYFLTDGEDTILLHNSE     34
                                     ||||||||||||||||||||||||||||||||||
BSU11030___yi      1 MLTKSAENKRNRKDDSMRPGQQLTLSIDHQTDFGYFLTDGEDTILLHNSE     50

BSNT_01862___     35 MTEDIGDRDEVEVFIYVDQQERLAATMKIPVISADEYGWVEVVDKVEDMG     84
                     |||||.||||||||||||||||||||||||:|||||||||||||||||||
BSU11030___yi     51 MTEDIEDRDEVEVFIYVDQQERLAATMKIPIISADEYGWVEVVDKVEDMG    100

BSNT_01862___     85 VFVDVGLSKDALVATEHLPPYEDVWPQKGDKLYCMLKVTNRGRMFAKPAP    134
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    101 VFVDVGLSKDALVATEHLPPYEDVWPQKGDKLYCMLKVTNRGRMFAKPAP    150

BSNT_01862___    135 EDIISELFTDASEDLMNKELTGTVYRLIASGSFVITDDGIRCFIHPSERK    184
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    151 EDIISELFTDASEDLMNKELTGTVYRLIASGSFVITDDGIRCFIHPSERK    200

BSNT_01862___    185 EEPRLGSKVTGRVIQVKEDGSVNLSLLPRKQDAMSVDAECILTYMRMRNG    234
                     |||||||:||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    201 EEPRLGSRVTGRVIQVKEDGSVNLSLLPRKQDAMSVDAECILTYMRMRNG    250

BSNT_01862___    235 AMPYSDKSQPDDIRERFNMSKAAFKRALGHLMKNGKVYQENGWTYEKK    282
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi    251 AMPYSDKSQPDDIRERFNMSKAAFKRALGHLMKNGKVYQENGWTYEKK    298


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