Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01862 and BSU11030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:09
# Commandline: needle
# -asequence dna-align/BSNT_01862___yitL.1.22522.seq
# -bsequence dna-align/BSU11030___yitL.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01862___yitL-BSU11030___yitL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01862___yitL-BSU11030___yitL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: BSU11030___yitL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity: 843/897 (94.0%)
# Similarity: 843/897 (94.0%)
# Gaps: 48/897 ( 5.4%)
# Score: 4191.0
#
#
#=======================================
BSNT_01862___ 1 ------------------------------------------------AT 2
||
BSU11030___yi 1 ATGTTAACAAAATCCGCAGAGAATAAGCGGAACAGGAAGGACGATAGCAT 50
BSNT_01862___ 3 GAGACCAGGGCAGCAATTAACCTTGAGTATAGATCACCAAACCGACTTCG 52
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 51 GAGACCAGGGCAGCAATTAACCTTGAGTATAGATCACCAAACCGACTTCG 100
BSNT_01862___ 53 GTTACTTTTTAACCGATGGGGAAGATACGATTCTCTTACATAACAGTGAA 102
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 101 GTTACTTTTTAACCGATGGGGAAGATACGATTCTCTTACATAACAGTGAA 150
BSNT_01862___ 103 ATGACTGAGGATATCGGGGACAGAGACGAAGTAGAAGTCTTTATATACGT 152
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU11030___yi 151 ATGACTGAGGATATCGAGGACAGAGACGAAGTAGAAGTCTTTATATACGT 200
BSNT_01862___ 153 CGACCAGCAGGAAAGGCTTGCGGCCACGATGAAAATTCCGGTCATCAGCG 202
.|||||||||||||||||||||||||||||||||||||||.|||||||||
BSU11030___yi 201 AGACCAGCAGGAAAGGCTTGCGGCCACGATGAAAATTCCGATCATCAGCG 250
BSNT_01862___ 203 CGGATGAATATGGCTGGGTTGAAGTGGTGGATAAAGTGGAAGATATGGGC 252
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 251 CGGATGAATATGGCTGGGTTGAAGTGGTGGATAAAGTGGAAGATATGGGC 300
BSNT_01862___ 253 GTTTTCGTTGATGTCGGTTTATCGAAGGACGCACTAGTCGCAACTGAGCA 302
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 301 GTTTTCGTTGATGTCGGTTTATCGAAGGACGCACTAGTCGCAACTGAGCA 350
BSNT_01862___ 303 TTTGCCGCCGTATGAAGATGTCTGGCCGCAAAAAGGGGACAAACTTTACT 352
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU11030___yi 351 TTTGCCGCCGTACGAAGATGTCTGGCCGCAAAAAGGGGACAAACTTTACT 400
BSNT_01862___ 353 GTATGCTGAAGGTGACGAACCGGGGGCGCATGTTTGCGAAACCAGCGCCG 402
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 401 GTATGCTGAAGGTGACGAACCGGGGGCGCATGTTTGCGAAACCAGCGCCG 450
BSNT_01862___ 403 GAAGATATCATCAGCGAACTGTTTACCGACGCTTCAGAAGATCTGATGAA 452
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 451 GAAGATATCATCAGCGAACTGTTTACCGACGCTTCAGAAGATCTGATGAA 500
BSNT_01862___ 453 TAAAGAGCTGACAGGTACGGTGTACAGGCTGATCGCATCGGGTTCATTCG 502
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 501 TAAAGAGCTGACAGGTACGGTGTACAGGCTGATCGCATCGGGTTCATTCG 550
BSNT_01862___ 503 TGATCACGGATGACGGTATCCGCTGTTTTATTCACCCGTCAGAAAGAAAA 552
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 551 TGATCACGGATGACGGTATCCGCTGTTTTATTCACCCGTCAGAAAGAAAA 600
BSNT_01862___ 553 GAGGAGCCAAGACTGGGTTCAAAAGTCACAGGCCGGGTGATTCAAGTGAA 602
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU11030___yi 601 GAGGAGCCAAGACTGGGTTCAAGAGTCACAGGCCGGGTGATTCAAGTGAA 650
BSNT_01862___ 603 AGAAGACGGTTCAGTCAACTTGTCGCTGCTTCCGAGAAAACAGGATGCAA 652
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 651 AGAAGACGGTTCAGTCAACTTGTCGCTGCTTCCGAGAAAACAGGATGCAA 700
BSNT_01862___ 653 TGTCTGTTGATGCTGAGTGCATTCTAACGTATATGAGAATGAGAAACGGT 702
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 701 TGTCAGTTGATGCTGAGTGCATTCTAACGTATATGAGAATGAGAAACGGT 750
BSNT_01862___ 703 GCCATGCCGTACAGTGACAAAAGCCAGCCTGACGATATCAGAGAACGTTT 752
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 751 GCCATGCCGTACAGTGACAAAAGCCAGCCTGACGATATCAGAGAACGTTT 800
BSNT_01862___ 753 TAATATGAGCAAAGCCGCCTTTAAACGCGCGCTGGGCCATTTGATGAAAA 802
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 801 TAATATGAGCAAAGCCGCCTTTAAACGCGCGCTGGGCCATTTGATGAAAA 850
BSNT_01862___ 803 ACGGAAAAGTGTATCAGGAAAATGGATGGACATACGAGAAAAAATAG 849
|||||||||||||||||||||||||||||||||||||||||||||||
BSU11030___yi 851 ACGGAAAAGTGTATCAGGAAAATGGATGGACATACGAGAAAAAATAG 897
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