Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01858 and BSU10990

See DNA alignment / Visit BSNT_01858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:08
# Commandline: needle
#    -asequence pep-align/BSNT_01858.1.22522.seq
#    -bsequence pep-align/BSU10990___yitH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01858-BSU10990___yitH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01858-BSU10990___yitH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01858
# 2: BSU10990___yitH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     137/282 (48.6%)
# Similarity:   142/282 (50.4%)
# Gaps:         134/282 (47.5%)
# Score: 722.0
# 
#
#=======================================

BSNT_01858         1 MDVVDELIELHEEHVSGLLRLCRQAGWPDYGEQELALLVQQGRFFGYQNV     50
                     ||||||||:|||||||||||||.||||||||||||.||||||||||||||
BSU10990___yi      1 MDVVDELIKLHEEHVSGLLRLCGQAGWPDYGEQELKLLVQQGRFFGYQNV     50

BSNT_01858        51 SGDIISCIGLFLFGRLASIGLVIVDKEYQRLGLGRRMVNACITQTDENTA    100
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU10990___yi     51 SGDIISCIGLFLFGRLTSIGLVIVDKEYQRLGLGRRMVNACITQTDENTA    100

BSNT_01858       101 IRLCATKEGLPLYEKAGFHTAGSVRKYSCHSFQPYTKKLDSQMSGFFL--    148
                     ||||||||||||||||||||||||||||||||||||||||::::.|..  
BSU10990___yi    101 IRLCATKEGLPLYEKAGFHTAGSVRKYSCHSFQPYTKKLDAELTSFREQD    150

BSNT_01858       148 --------------------------------------------------    148
                                                                       
BSU10990___yi    151 FHDLTAADLAAFGGDRSNLLQQLISASCECIIARNQDGQLIGYGLSVQTP    200

BSNT_01858       148 --------------------------------------------------    148
                                                                       
BSU10990___yi    201 ANLKFGPIIAPSSDVAAQIITRLAAGKQGPMRIDIPSEHTSLHDSLIEMG    250

BSNT_01858       148 --------------------------------    148
                                                     
BSU10990___yi    251 FHKDDEPPILFYQKKAPIQNGHLYALISQALG    282


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