Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01858 and BSU10990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:08
# Commandline: needle
# -asequence dna-align/BSNT_01858.1.22522.seq
# -bsequence dna-align/BSU10990___yitH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01858-BSU10990___yitH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01858-BSU10990___yitH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01858
# 2: BSU10990___yitH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity: 421/853 (49.4%)
# Similarity: 421/853 (49.4%)
# Gaps: 410/853 (48.1%)
# Score: 1969.5
#
#
#=======================================
BSNT_01858 1 ATGGATGTAGTGGATGAGCTGATTGAGCTTCATGAAGAACATGTTTCCGG 50
|||||.|||||.|||||.||||||.||||||||||||||||.||||||||
BSU10990___yi 1 ATGGACGTAGTAGATGAACTGATTAAGCTTCATGAAGAACACGTTTCCGG 50
BSNT_01858 51 CTTATTGCGGCTTTGCAGGCAAGCCGGGTGGCCGGATTACGGCGAACAAG 100
||||||||||||||||.||||||||||||||||||||||.||||||||||
BSU10990___yi 51 CTTATTGCGGCTTTGCGGGCAAGCCGGGTGGCCGGATTATGGCGAACAAG 100
BSNT_01858 101 AGCTGGCACTGCTTGTCCAGCAAGGACGCTTTTTCGGCTATCAAAATGTC 150
|||||..|||||||||.|||||.||||||||||||||.||||||||||||
BSU10990___yi 101 AGCTGAAACTGCTTGTTCAGCAGGGACGCTTTTTCGGTTATCAAAATGTC 150
BSNT_01858 151 AGCGGTGATATTATTTCCTGCATCGGCTTGTTTTTGTTTGGCCGTCTTGC 200
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU10990___yi 151 AGCGGTGATATTATTTCCTGCATCGGCTTGTTTTTGTTTGGCCGTCTTAC 200
BSNT_01858 201 TTCTATCGGCCTCGTTATCGTTGACAAGGAATATCAACGGCTCGGTCTCG 250
||||||||||||.|||||||||||||||||||||||||||||||||||.|
BSU10990___yi 201 TTCTATCGGCCTTGTTATCGTTGACAAGGAATATCAACGGCTCGGTCTTG 250
BSNT_01858 251 GCCGGCGTATGGTAAACGCCTGTATCACCCAAACGGATGAAAACACCGCC 300
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU10990___yi 251 GCCGGCGTATGGTAAACGCCTGTATTACCCAAACGGATGAAAACACCGCC 300
BSNT_01858 301 ATCAGGCTTTGCGCCACAAAAGAAGGTTTGCCGCTTTATGAAAAAGCAGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10990___yi 301 ATCAGGCTTTGCGCCACAAAAGAAGGTTTGCCGCTTTATGAAAAAGCAGG 350
BSNT_01858 351 TTTTCATACGGCTGGTTCAGTGCGAAAGTACAGCTGTCACAGTTTTCAAC 400
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU10990___yi 351 TTTTCATACGGCAGGTTCAGTGCGAAAGTACAGCTGTCACAGTTTTCAAC 400
BSNT_01858 401 CTTATACAAAAAAGCTTGATTCTCAAATG---TCGGGTTT---------- 437
||||||||||||||||||||.||.||.|| || .|||
BSU10990___yi 401 CTTATACAAAAAAGCTTGATGCTGAACTGACATC--CTTTAGAGAACAAG 448
BSNT_01858 438 --TTTCTTATGA-------------------------------------- 447
|||| |.||
BSU10990___yi 449 ACTTTC--ACGACTTAACCGCGGCGGATCTGGCTGCCTTTGGCGGAGATC 496
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 497 GATCAAACCTTTTGCAGCAGCTTATTTCTGCTTCATGCGAATGTATCATC 546
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 547 GCCAGAAATCAGGACGGACAGCTCATTGGCTACGGACTTTCTGTACAGAC 596
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 597 ACCGGCCAATTTGAAATTCGGCCCTATCATCGCTCCATCATCAGATGTTG 646
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 647 CAGCACAGATAATTACAAGGCTGGCGGCCGGCAAACAAGGGCCGATGCGA 696
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 697 ATCGATATACCGAGTGAACACACGTCTCTGCATGACAGCCTGATAGAAAT 746
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 747 GGGATTTCATAAAGATGATGAACCTCCGATTTTGTTCTATCAGAAAAAAG 796
BSNT_01858 447 -------------------------------------------------- 447
BSU10990___yi 797 CGCCTATTCAAAATGGACACTTATATGCTTTGATTTCACAGGCTCTCGGT 846
BSNT_01858 447 --- 447
BSU10990___yi 847 TAA 849
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