Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01820 and BSU10680

See DNA alignment / Visit BSNT_01820 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:04
# Commandline: needle
#    -asequence pep-align/BSNT_01820.1.22522.seq
#    -bsequence pep-align/BSU10680___gerPE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01820-BSU10680___gerPE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01820-BSU10680___gerPE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01820
# 2: BSU10680___gerPE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:     109/133 (82.0%)
# Similarity:   113/133 (85.0%)
# Gaps:          20/133 (15.0%)
# Score: 554.0
# 
#
#=======================================

BSNT_01820         1 --------------------MFQVGDTNEIDMSVKVFAVQRSLSTFYNNE     30
                                         :||||||||||||||||||||||||||:||
BSU10680___ge      1 MLKRISRIRLVKFNSLGIASVFQVGDTNEIDMSVKVFAVQRSLSTFYHNE     50

BSNT_01820        31 GSFNKKEYQIFQQQAVKPIPETGVQSAFCHEVPAIYVRSIKIQGVSASSV     80
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
BSU10680___ge     51 GSFNKKEYQIFQQQAVKPLPETGVQSAFCHEVPAIYVRSIKIQGVSASSV    100

BSNT_01820        81 LHAGSASLIRGDARIKHIRQIQSPRSQSPAKNI    113
                     ||||||||||||||:||||||||||||||||||
BSU10680___ge    101 LHAGSASLIRGDARLKHIRQIQSPRSQSPAKNI    133


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