Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01820 and BSU10680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:04
# Commandline: needle
# -asequence dna-align/BSNT_01820.1.22522.seq
# -bsequence dna-align/BSU10680___gerPE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01820-BSU10680___gerPE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01820-BSU10680___gerPE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01820
# 2: BSU10680___gerPE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 329/402 (81.8%)
# Similarity: 329/402 (81.8%)
# Gaps: 60/402 (14.9%)
# Score: 1593.0
#
#
#=======================================
BSNT_01820 0 -------------------------------------------------- 0
BSU10680___ge 1 ATGCTTAAACGCATATCGCGCATCAGACTAGTTAAGTTTAATTCTCTCGG 50
BSNT_01820 1 ----------GTGTTTCAAGTTGGCGACACAAATGAAATCGATATGAGTG 40
||||||||||||||||||||||||||||||||||||||||
BSU10680___ge 51 GATCGCAAGTGTGTTTCAAGTTGGCGACACAAATGAAATCGATATGAGTG 100
BSNT_01820 41 TAAAAGTATTTGCTGTTCAGCGTTCTCTGTCCACGTTTTACAATAATGAA 90
||||||||||||||||.||||||||||||||||||||||||.||||||||
BSU10680___ge 101 TAAAAGTATTTGCTGTGCAGCGTTCTCTGTCCACGTTTTACCATAATGAA 150
BSNT_01820 91 GGCTCATTTAACAAAAAGGAGTACCAGATCTTTCAGCAGCAGGCAGTGAA 140
|||||||||||||||||||||||.||||||||||||||||||||.|||||
BSU10680___ge 151 GGCTCATTTAACAAAAAGGAGTATCAGATCTTTCAGCAGCAGGCCGTGAA 200
BSNT_01820 141 GCCGATTCCCGAAACAGGTGTACAAAGCGCATTTTGCCACGAGGTGCCGG 190
||||.|.|||||||||||||||||||||||.|||||||||||||||||||
BSU10680___ge 201 GCCGCTCCCCGAAACAGGTGTACAAAGCGCGTTTTGCCACGAGGTGCCGG 250
BSNT_01820 191 CTATTTATGTTCGCAGCATCAAAATTCAAGGGGTGTCCGCCTCTTCTGTT 240
||||||||||||||||||||||||||||||||||.||.||||||||||||
BSU10680___ge 251 CTATTTATGTTCGCAGCATCAAAATTCAAGGGGTCTCAGCCTCTTCTGTT 300
BSNT_01820 241 TTACATGCTGGTTCAGCTTCGCTTATCCGCGGTGATGCGAGAATCAAACA 290
||||||||.||.||||||||||||||.|||||||||||||||.|||||||
BSU10680___ge 301 TTACATGCCGGATCAGCTTCGCTTATTCGCGGTGATGCGAGACTCAAACA 350
BSNT_01820 291 TATCAGACAGATTCAGTCTCCGCGCTCACAATCGCCCGCCAAGAACATAT 340
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10680___ge 351 TATCAGACAGATTCAGTCTCCGCGCTCACAATCGCCCGCCAAGAACATAT 400
BSNT_01820 341 AA 342
||
BSU10680___ge 401 AA 402
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