Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01820 and BSU10680

See Amino acid alignment / Visit BSNT_01820 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:04
# Commandline: needle
#    -asequence dna-align/BSNT_01820.1.22522.seq
#    -bsequence dna-align/BSU10680___gerPE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01820-BSU10680___gerPE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01820-BSU10680___gerPE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01820
# 2: BSU10680___gerPE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity:     329/402 (81.8%)
# Similarity:   329/402 (81.8%)
# Gaps:          60/402 (14.9%)
# Score: 1593.0
# 
#
#=======================================

BSNT_01820         0 --------------------------------------------------      0
                                                                       
BSU10680___ge      1 ATGCTTAAACGCATATCGCGCATCAGACTAGTTAAGTTTAATTCTCTCGG     50

BSNT_01820         1 ----------GTGTTTCAAGTTGGCGACACAAATGAAATCGATATGAGTG     40
                               ||||||||||||||||||||||||||||||||||||||||
BSU10680___ge     51 GATCGCAAGTGTGTTTCAAGTTGGCGACACAAATGAAATCGATATGAGTG    100

BSNT_01820        41 TAAAAGTATTTGCTGTTCAGCGTTCTCTGTCCACGTTTTACAATAATGAA     90
                     ||||||||||||||||.||||||||||||||||||||||||.||||||||
BSU10680___ge    101 TAAAAGTATTTGCTGTGCAGCGTTCTCTGTCCACGTTTTACCATAATGAA    150

BSNT_01820        91 GGCTCATTTAACAAAAAGGAGTACCAGATCTTTCAGCAGCAGGCAGTGAA    140
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
BSU10680___ge    151 GGCTCATTTAACAAAAAGGAGTATCAGATCTTTCAGCAGCAGGCCGTGAA    200

BSNT_01820       141 GCCGATTCCCGAAACAGGTGTACAAAGCGCATTTTGCCACGAGGTGCCGG    190
                     ||||.|.|||||||||||||||||||||||.|||||||||||||||||||
BSU10680___ge    201 GCCGCTCCCCGAAACAGGTGTACAAAGCGCGTTTTGCCACGAGGTGCCGG    250

BSNT_01820       191 CTATTTATGTTCGCAGCATCAAAATTCAAGGGGTGTCCGCCTCTTCTGTT    240
                     ||||||||||||||||||||||||||||||||||.||.||||||||||||
BSU10680___ge    251 CTATTTATGTTCGCAGCATCAAAATTCAAGGGGTCTCAGCCTCTTCTGTT    300

BSNT_01820       241 TTACATGCTGGTTCAGCTTCGCTTATCCGCGGTGATGCGAGAATCAAACA    290
                     ||||||||.||.||||||||||||||.|||||||||||||||.|||||||
BSU10680___ge    301 TTACATGCCGGATCAGCTTCGCTTATTCGCGGTGATGCGAGACTCAAACA    350

BSNT_01820       291 TATCAGACAGATTCAGTCTCCGCGCTCACAATCGCCCGCCAAGAACATAT    340
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10680___ge    351 TATCAGACAGATTCAGTCTCCGCGCTCACAATCGCCCGCCAAGAACATAT    400

BSNT_01820       341 AA    342
                     ||
BSU10680___ge    401 AA    402


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