Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01061 and BSU06180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:35
# Commandline: needle
# -asequence pep-align/BSNT_01061.1.22522.seq
# -bsequence pep-align/BSU06180___pspA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01061-BSU06180___pspA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01061-BSU06180___pspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01061
# 2: BSU06180___pspA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 104/227 (45.8%)
# Similarity: 106/227 (46.7%)
# Gaps: 120/227 (52.9%)
# Score: 516.0
#
#
#=======================================
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 1 MSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAV 50
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 51 MAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTSLESK 100
BSNT_01061 1 --------------------MHDKLVSDIGELEARKNMIKAKWAVAKTQE 30
||||||||||||||||||||||||||||||
BSU06180___ps 101 LSELQAANQIAATNAAQMRKMHDKLVSDIGELEARKNMIKAKWAVAKTQE 150
BSNT_01061 31 RMNKLDASVSSTSQSMSAFGRMEDKVNKALDQANAMAELNSAPQDDMADL 80
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU06180___ps 151 RMNKLGASVSSTSQSMSAFGRMEDKVNKALDQANAMAELNSAPQDDMADL 200
BSNT_01061 81 TAKYDTGGSSQIDDELAALKAKMMLDK 107
:||||||||||:|||||||||||||||
BSU06180___ps 201 SAKYDTGGSSQVDDELAALKAKMMLDK 227
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