Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01061 and BSU06180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:35
# Commandline: needle
# -asequence dna-align/BSNT_01061.1.22522.seq
# -bsequence dna-align/BSU06180___pspA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01061-BSU06180___pspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01061-BSU06180___pspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01061
# 2: BSU06180___pspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 684
# Identity: 320/684 (46.8%)
# Similarity: 320/684 (46.8%)
# Gaps: 360/684 (52.6%)
# Score: 1584.0
#
#
#=======================================
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 1 ATGAGTATAATTGGAAGATTTAAAGATATTATGTCTGCGAATATCAATGC 50
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 51 TTTATTGGACAAGGCTGAAAATCCGGAGAAAATGGTAGATCAATATTTAA 100
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 101 GAAATATGAATAGCGATTTGGCTAAGGTTAAGGCAGAAACAGCAGCTGTT 150
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 151 ATGGCTGAGGAGCAGAGAGCAAAAAGAGAATATCACGAATGCCAGGCGGA 200
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 201 TATGGAAAAGATGGAAAGCTATGCAATGAAGGCGCTGCAAGCCGGGAATG 250
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 251 AGAGCGATGCGAGAAAATTTCTTGAAAGAAAAACATCTTTGGAGTCAAAG 300
BSNT_01061 0 -------------------------------------------------- 0
BSU06180___ps 301 CTTTCTGAGCTGCAGGCGGCGAATCAAATTGCTGCAACCAATGCCGCACA 350
BSNT_01061 1 ----------ATGCATGACAAATTGGTATCTGACATTGGAGAGCTGGAAG 40
||||||||||||||||||||||||||||||||||||||||
BSU06180___ps 351 GATGAGAAAGATGCATGACAAATTGGTATCTGACATTGGAGAGCTGGAAG 400
BSNT_01061 41 CACGTAAAAATATGATCAAGGCGAAGTGGGCAGTAGCGAAAACGCAAGAA 90
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU06180___ps 401 CACGCAAAAATATGATCAAGGCGAAGTGGGCAGTAGCGAAAACGCAAGAA 450
BSNT_01061 91 AGAATGAACAAACTGGACGCTTCTGTTTCAAGTACAAGCCAATCAATGTC 140
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU06180___ps 451 AGAATGAACAAACTGGGCGCTTCTGTTTCAAGTACAAGCCAATCAATGTC 500
BSNT_01061 141 TGCATTCGGCCGAATGGAGGACAAAGTAAATAAGGCACTTGATCAGGCCA 190
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06180___ps 501 TGCATTCGGCCGAATGGAGGACAAAGTAAATAAGGCACTTGATCAGGCCA 550
BSNT_01061 191 ATGCAATGGCTGAACTGAACAGCGCTCCGCAGGATGATATGGCTGATCTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06180___ps 551 ATGCAATGGCTGAACTGAACAGCGCTCCGCAGGATGATATGGCTGATCTG 600
BSNT_01061 241 ACTGCAAAGTATGACACTGGCGGTTCAAGCCAGATTGATGATGAACTTGC 290
.||||||||||||||||||||||||||||||||.||||||||||||||||
BSU06180___ps 601 TCTGCAAAGTATGACACTGGCGGTTCAAGCCAGGTTGATGATGAACTTGC 650
BSNT_01061 291 GGCGTTAAAAGCGAAAATGATGCTCGATAAGTAA 324
||||||||||||||||||||||||||||||||||
BSU06180___ps 651 GGCGTTAAAAGCGAAAATGATGCTCGATAAGTAA 684
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