Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01031 and BSU05910

See DNA alignment / Visit BSNT_01031 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:31
# Commandline: needle
#    -asequence pep-align/BSNT_01031___ydiB.1.22522.seq
#    -bsequence pep-align/BSU05910___ydiB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01031___ydiB-BSU05910___ydiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01031___ydiB-BSU05910___ydiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01031___ydiB
# 2: BSU05910___ydiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     157/158 (99.4%)
# Similarity:   157/158 (99.4%)
# Gaps:           0/158 ( 0.0%)
# Score: 823.0
# 
#
#=======================================

BSNT_01031___      1 MKQLKWRTVNPEETKAIAKLAAAFAKPGDVLTLEGDLGAGKTTFTKGFAE     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU05910___yd      1 MKQLKWRTVNPEETKAIAKLTAAFAKPGDVLTLEGDLGAGKTTFTKGFAE     50

BSNT_01031___     51 GLGITRIVNSPTFTIIKEYNDGVLPLYHMDVYRMEDESEDLGLDEYFHGQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd     51 GLGITRIVNSPTFTIIKEYNDGVLPLYHMDVYRMEDESEDLGLDEYFHGQ    100

BSNT_01031___    101 GVCLVEWAHLIEEQLPQERLQIVIKRAGDDEREITFTAVGNRYEMLCEEL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    101 GVCLVEWAHLIEEQLPQERLQIVIKRAGDDEREITFTAVGNRYEMLCEEL    150

BSNT_01031___    151 SRHDNISN    158
                     ||||||||
BSU05910___yd    151 SRHDNISN    158


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