Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01031 and BSU05910

See Amino acid alignment / Visit BSNT_01031 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:31
# Commandline: needle
#    -asequence dna-align/BSNT_01031___ydiB.1.22522.seq
#    -bsequence dna-align/BSU05910___ydiB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01031___ydiB-BSU05910___ydiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01031___ydiB-BSU05910___ydiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01031___ydiB
# 2: BSU05910___ydiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     475/477 (99.6%)
# Similarity:   475/477 (99.6%)
# Gaps:           0/477 ( 0.0%)
# Score: 2367.0
# 
#
#=======================================

BSNT_01031___      1 GTGAAGCAATTAAAATGGAGAACTGTAAATCCAGAAGAAACAAAAGCAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd      1 GTGAAGCAATTAAAATGGAGAACTGTAAATCCAGAAGAAACAAAAGCAAT     50

BSNT_01031___     51 TGCCAAGCTTGCGGCAGCGTTTGCTAAACCGGGAGACGTCCTGACATTAG    100
                     |||||||||..|||||||||||||||||||||||||||||||||||||||
BSU05910___yd     51 TGCCAAGCTGACGGCAGCGTTTGCTAAACCGGGAGACGTCCTGACATTAG    100

BSNT_01031___    101 AGGGCGATTTAGGTGCAGGAAAAACGACTTTTACGAAAGGTTTTGCAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    101 AGGGCGATTTAGGTGCAGGAAAAACGACTTTTACGAAAGGTTTTGCAGAA    150

BSNT_01031___    151 GGGCTGGGAATTACACGTATTGTAAACAGTCCGACTTTTACAATTATAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    151 GGGCTGGGAATTACACGTATTGTAAACAGTCCGACTTTTACAATTATAAA    200

BSNT_01031___    201 AGAATATAACGATGGCGTACTTCCTCTTTATCACATGGATGTGTATAGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    201 AGAATATAACGATGGCGTACTTCCTCTTTATCACATGGATGTGTATAGAA    250

BSNT_01031___    251 TGGAAGATGAAAGTGAAGATTTGGGACTTGATGAATATTTTCACGGACAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    251 TGGAAGATGAAAGTGAAGATTTGGGACTTGATGAATATTTTCACGGACAA    300

BSNT_01031___    301 GGTGTCTGTCTCGTTGAATGGGCTCATTTAATTGAAGAACAGCTGCCACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    301 GGTGTCTGTCTCGTTGAATGGGCTCATTTAATTGAAGAACAGCTGCCACA    350

BSNT_01031___    351 GGAGCGACTGCAAATTGTCATCAAAAGAGCTGGTGATGATGAGCGGGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    351 GGAGCGACTGCAAATTGTCATCAAAAGAGCTGGTGATGATGAGCGGGAAA    400

BSNT_01031___    401 TTACCTTTACTGCTGTCGGGAATCGGTATGAAATGCTTTGTGAGGAGTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05910___yd    401 TTACCTTTACTGCTGTCGGGAATCGGTATGAAATGCTTTGTGAGGAGTTA    450

BSNT_01031___    451 AGTAGACATGACAATATTAGCAATTGA    477
                     |||||||||||||||||||||||||||
BSU05910___yd    451 AGTAGACATGACAATATTAGCAATTGA    477


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