Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01012 and BSU05870
See
DNA alignment /
Visit
BSNT_01012 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:31
# Commandline: needle
# -asequence pep-align/BSNT_01012.1.22522.seq
# -bsequence pep-align/BSU05870___gmuF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01012-BSU05870___gmuF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01012-BSU05870___gmuF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01012
# 2: BSU05870___gmuF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity: 133/315 (42.2%)
# Similarity: 137/315 (43.5%)
# Gaps: 178/315 (56.5%)
# Score: 655.0
#
#
#=======================================
BSNT_01012 0 -------------------------------------------------- 0
BSU05870___gm 1 MTHPLFLEPVFKERLWGGTKLRDAFGYAIPSQKTGECWAVSAHAHGSSSV 50
BSNT_01012 1 ---------------------------MFPLLVKLLDANMDLSVQVHPDD 23
:||||||||||||||||||||||
BSU05870___gm 51 KNGPLAGKTLDQVWKDHPEIFGFPDGKVFPLLVKLLDANMDLSVQVHPDD 100
BSNT_01012 24 DYAKLHENGDLGKT------------------------------------ 37
||||||||||||||
BSU05870___gm 101 DYAKLHENGDLGKTECWYIIDCKDDAELILGHHASTKEEFKQRIESGDWN 150
BSNT_01012 37 -------------------------------------------------- 37
BSU05870___gm 151 GLLRRIKIKPGDFFYVPSGTLHALCKGTLVLEIQQNSDTTYRVYDYDRCN 200
BSNT_01012 38 ---------------VITIPHIDKVHTPEVKEVGNAEIIVYVQSDYFSVY 72
|||||||||||||||||||||||||||||||||||
BSU05870___gm 201 DQGQKRTLHIEKAMEVITIPHIDKVHTPEVKEVGNAEIIVYVQSDYFSVY 250
BSNT_01012 73 KWKISGRAAFPSHQTYLLGSVLSGSGRIINNGIQYECNAGSHFVLPAHFG 122
||||||||||||:||||||||||||||||||||||||||||||:||||||
BSU05870___gm 251 KWKISGRAAFPSYQTYLLGSVLSGSGRIINNGIQYECNAGSHFILPAHFG 300
BSNT_01012 123 EFSIEGTCEFMISHP 137
||:||||||||||||
BSU05870___gm 301 EFTIEGTCEFMISHP 315
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.