Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01012 and BSU05870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:31
# Commandline: needle
# -asequence dna-align/BSNT_01012.1.22522.seq
# -bsequence dna-align/BSU05870___gmuF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01012-BSU05870___gmuF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01012-BSU05870___gmuF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01012
# 2: BSU05870___gmuF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity: 406/948 (42.8%)
# Similarity: 406/948 (42.8%)
# Gaps: 534/948 (56.3%)
# Score: 1837.0
#
#
#=======================================
BSNT_01012 0 -------------------------------------------------- 0
BSU05870___gm 1 ATGACGCATCCATTATTTTTAGAGCCTGTCTTTAAAGAAAGACTATGGGG 50
BSNT_01012 0 -------------------------------------------------- 0
BSU05870___gm 51 AGGGACGAAGCTTCGTGACGCTTTTGGCTACGCAATACCCTCACAAAAAA 100
BSNT_01012 0 -------------------------------------------------- 0
BSU05870___gm 101 CAGGTGAGTGCTGGGCCGTTTCTGCACATGCCCATGGCTCGTCGTCTGTA 150
BSNT_01012 0 -------------------------------------------------- 0
BSU05870___gm 151 AAAAATGGCCCGCTGGCAGGAAAGACACTTGATCAAGTATGGAAAGATCA 200
BSNT_01012 1 -------------------------------GTGTTTCCGCTGCTGGTAA 19
|||||||||||||||||||
BSU05870___gm 201 TCCAGAGATATTCGGGTTTCCGGATGGTAAGGTGTTTCCGCTGCTGGTAA 250
BSNT_01012 20 AGCTGCTGGACGCCAATATGGATCTCTCCGTGCAAGTCCATCCTGATGAT 69
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05870___gm 251 AGCTGCTGGACGCCAATATGGATCTCTCCGTGCAAGTCCATCCTGATGAT 300
BSNT_01012 70 GATTATGCAAAACTGCATGAAAATGGCGACCTTGGTAAAACG-------- 111
|||||||||||||||||.||||||||||||||||||||||||
BSU05870___gm 301 GATTATGCAAAACTGCACGAAAATGGCGACCTTGGTAAAACGGAGTGCTG 350
BSNT_01012 111 -------------------------------------------------- 111
BSU05870___gm 351 GTATATCATTGATTGCAAAGATGACGCCGAACTAATTTTGGGACATCATG 400
BSNT_01012 111 -------------------------------------------------- 111
BSU05870___gm 401 CAAGCACAAAGGAAGAGTTCAAACAACGAATAGAAAGCGGTGATTGGAAC 450
BSNT_01012 111 -------------------------------------------------- 111
BSU05870___gm 451 GGGCTGCTGAGGCGAATCAAAATCAAGCCAGGAGATTTCTTTTATGTGCC 500
BSNT_01012 111 -------------------------------------------------- 111
BSU05870___gm 501 AAGCGGTACACTCCATGCTTTATGTAAGGGAACCCTTGTCCTTGAAATCC 550
BSNT_01012 111 -------------------------------------------------- 111
BSU05870___gm 551 AGCAAAACTCTGATACAACATATCGCGTATACGATTATGACCGCTGTAAT 600
BSNT_01012 112 ---------------------------------------------GTCAT 116
|||||
BSU05870___gm 601 GACCAGGGCCAAAAAAGAACTCTTCATATAGAAAAAGCCATGGAAGTCAT 650
BSNT_01012 117 AACGATACCGCATATCGATAAAGTGCATACACCGGAAGTAAAAGAAGTTG 166
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05870___gm 651 AACGATACCGCATATCGATAAAGTGCATACACCGGAAGTAAAAGAAGTTG 700
BSNT_01012 167 GTAACGCTGAGATCATTGTTTATGTGCAATCAGATTATTTCTCAGTGTAC 216
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05870___gm 701 GTAACGCTGAGATCATTGTTTATGTGCAATCAGATTATTTCTCAGTGTAC 750
BSNT_01012 217 AAATGGAAGATTAGCGGCCGAGCTGCTTTTCCTTCACATCAAACCTATTT 266
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05870___gm 751 AAATGGAAGATTAGCGGCCGAGCTGCTTTTCCTTCATATCAAACCTATTT 800
BSNT_01012 267 GCTGGGGAGTGTTCTGAGCGGATCAGGACGAATCATAAATAATGGTATTC 316
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05870___gm 801 GCTGGGGAGTGTTCTGAGCGGATCAGGACGAATCATAAATAATGGTATTC 850
BSNT_01012 317 AGTATGAATGCAATGCAGGCTCACACTTTGTCTTGCCTGCGCATTTTGGC 366
|||||||||||||||||||||||||||||.|..||||||||||||||||.
BSU05870___gm 851 AGTATGAATGCAATGCAGGCTCACACTTTATTCTGCCTGCGCATTTTGGA 900
BSNT_01012 367 GAGTTTTCAATAGAAGGAACATGTGAATTCATGATATCTCATCCTTAA 414
||.|||.|||||||||||||||||||||||||||||||||||||||||
BSU05870___gm 901 GAATTTACAATAGAAGGAACATGTGAATTCATGATATCTCATCCTTAA 948
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