Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00987 and BSU05730

See DNA alignment / Visit BSNT_00987 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:29
# Commandline: needle
#    -asequence pep-align/BSNT_00987___ydhF.1.22522.seq
#    -bsequence pep-align/BSU05730___ydhF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00987___ydhF-BSU05730___ydhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00987___ydhF-BSU05730___ydhF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00987___ydhF
# 2: BSU05730___ydhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     232/250 (92.8%)
# Similarity:   235/250 (94.0%)
# Gaps:          14/250 ( 5.6%)
# Score: 1202.0
# 
#
#=======================================

BSNT_00987___      1 MYEVTGSLFNGGIIMRRILSIFVFAIMLAGCSSNASTEKQHAGGEKTVKA     50
                                   |||||||.||||||||||||||||||||||||||||
BSU05730___yd      1 --------------MRRILSILVFAIMLAGCSSNASTEKQHAGGEKTVKA     36

BSNT_00987___     51 EPQSTSSQKDSTDDYQPNSQVTDDRSLHKVGQTFSDDKGKAVLKDIKQVN    100
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
BSU05730___yd     37 EPQSTSSQKDSTDDYQPNSQVTDDRTLHKVGQTFSDDKGKAVLKDIKQVN     86

BSNT_00987___    101 KTYKIGDVELTVKEMKLIHLRPDYSMIDYFHELTHDEEFDFVKVFVDIKN    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd     87 KTYKIGDVELTVKEMKLIHLRPDYSMIDYFHELTHDEEFDFVKVFVDIKN    136

BSNT_00987___    151 TSTKKVNVAPIALMKTNTGETFDWNKDIYLEELNGELEGGAEKSGNLGFI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd    137 TSTKKVNVAPIALMKTNTGETFDWNKDIYLEELNGELEGGAEKSGNLGFI    186

BSNT_00987___    201 VNASSGHAHDKAADAEKKTKKIEWIEITTSDVFDHNHKKISDAQKIKIKF    250
                     ||||||||||||||||||||:|:|||||||||||||||||||||||||||
BSU05730___yd    187 VNASSGHAHDKAADAEKKTKEIKWIEITTSDVFDHNHKKISDAQKIKIKF    236


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