Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00987 and BSU05730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:29
# Commandline: needle
# -asequence dna-align/BSNT_00987___ydhF.1.22522.seq
# -bsequence dna-align/BSU05730___ydhF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00987___ydhF-BSU05730___ydhF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00987___ydhF-BSU05730___ydhF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00987___ydhF
# 2: BSU05730___ydhF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity: 706/753 (93.8%)
# Similarity: 706/753 (93.8%)
# Gaps: 42/753 ( 5.6%)
# Score: 3510.0
#
#
#=======================================
BSNT_00987___ 1 TTGTATGAAGTAACGGGATCTCTTTTTAATGGAGGAATCATCATGAGAAG 50
||||||||
BSU05730___yd 1 ------------------------------------------ATGAGAAG 8
BSNT_00987___ 51 AATTCTTTCAATTTTCGTTTTTGCTATCATGCTTGCGGGCTGCTCATCAA 100
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05730___yd 9 AATTCTTTCAATTCTCGTTTTTGCTATCATGCTTGCGGGCTGCTCATCAA 58
BSNT_00987___ 101 ACGCCAGTACTGAAAAACAGCATGCAGGCGGGGAGAAAACAGTAAAAGCT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 59 ACGCCAGTACTGAAAAACAGCATGCAGGCGGGGAGAAAACAGTAAAAGCT 108
BSNT_00987___ 151 GAGCCGCAAAGCACTTCATCCCAGAAGGACAGCACAGATGATTATCAGCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 109 GAGCCGCAAAGCACTTCATCCCAGAAGGACAGCACAGATGATTATCAGCC 158
BSNT_00987___ 201 TAATTCCCAGGTAACTGATGACCGGTCATTGCATAAGGTCGGCCAAACGT 250
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU05730___yd 159 TAATTCCCAGGTAACTGATGACCGGACATTGCATAAGGTCGGCCAAACGT 208
BSNT_00987___ 251 TTTCAGATGATAAAGGAAAAGCTGTCTTAAAAGATATCAAACAAGTGAAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 209 TTTCAGATGATAAAGGAAAAGCTGTCTTAAAAGATATCAAACAAGTGAAC 258
BSNT_00987___ 301 AAAACCTATAAAATTGGCGACGTGGAGTTAACAGTAAAAGAAATGAAGCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 259 AAAACCTATAAAATTGGCGACGTGGAGTTAACAGTAAAAGAAATGAAGCT 308
BSNT_00987___ 351 GATCCACTTGCGCCCGGACTACAGCATGATTGATTACTTTCATGAGTTAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 309 GATCCACTTGCGCCCGGACTACAGCATGATTGATTACTTTCATGAGTTAA 358
BSNT_00987___ 401 CACATGATGAAGAGTTTGATTTCGTTAAGGTTTTCGTTGATATCAAGAAC 450
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 359 CACACGATGAAGAGTTTGATTTCGTTAAGGTTTTCGTTGATATCAAGAAC 408
BSNT_00987___ 451 ACCTCTACAAAAAAAGTAAATGTTGCGCCGATTGCATTGATGAAAACAAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 409 ACCTCTACAAAAAAAGTAAATGTTGCGCCGATTGCATTGATGAAAACAAA 458
BSNT_00987___ 501 TACGGGTGAAACCTTTGATTGGAACAAAGATATTTATCTTGAAGAGTTAA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 459 TACGGGTGAAACCTTTGATTGGAACAAAGATATTTATCTTGAAGAGTTAA 508
BSNT_00987___ 551 ACGGCGAATTGGAAGGCGGCGCCGAAAAGTCCGGAAATCTCGGCTTTATT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 509 ACGGCGAATTGGAAGGCGGCGCCGAAAAGTCCGGAAATCTCGGCTTTATT 558
BSNT_00987___ 601 GTGAACGCATCAAGCGGCCATGCTCATGATAAGGCCGCGGATGCTGAGAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 559 GTGAACGCATCAAGCGGCCATGCTCATGATAAGGCCGCGGATGCTGAGAA 608
BSNT_00987___ 651 GAAAACAAAAAAGATCGAGTGGATCGAAATCACGACAAGTGACGTCTTTG 700
||||||||||.|||||.|||||||||||||||||||||||||||||||||
BSU05730___yd 609 GAAAACAAAAGAGATCAAGTGGATCGAAATCACGACAAGTGACGTCTTTG 658
BSNT_00987___ 701 ACCATAACCATAAGAAAATCAGTGATGCTCAAAAAATCAAAATCAAGTTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05730___yd 659 ACCATAACCATAAGAAAATCAGTGATGCTCAAAAAATCAAAATCAAGTTT 708
BSNT_00987___ 751 TAA 753
|||
BSU05730___yd 709 TAA 711
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