Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00969 and BSU05610

See DNA alignment / Visit BSNT_00969 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:26
# Commandline: needle
#    -asequence pep-align/BSNT_00969___expZ.1.22522.seq
#    -bsequence pep-align/BSU05610___vmlR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00969___expZ-BSU05610___vmlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00969___expZ-BSU05610___vmlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00969___expZ
# 2: BSU05610___vmlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 548
# Identity:     539/548 (98.4%)
# Similarity:   542/548 (98.9%)
# Gaps:           1/548 ( 0.2%)
# Score: 2751.0
# 
#
#=======================================

BSNT_00969___      1 MKEIVTLTNVSYEVKDQTVFKHVNASVQQGDIIGITGKNGAGKSTLLHLI     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU05610___vm      1 MKEIVTLTNVSYEVKDQTVFKHVNASVQQGDIIGIIGKNGAGKSTLLHLI     50

BSNT_00969___     51 HTDLAPSQGQILRKDIKLALVEQETAAYSFADQTPAEKKLLEKWHVPLRD    100
                     |.||||:|||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm     51 HNDLAPAQGQILRKDIKLALVEQETAAYSFADQTPAEKKLLEKWHVPLRD    100

BSNT_00969___    101 FHQLSGGEKLKARLAKGLSEDADLLLLDEPTNHLDEKSLQFLIQHLKHYS    150
                     ||||||||||||||||||||||||||||||||||||||||||||.||||:
BSU05610___vm    101 FHQLSGGEKLKARLAKGLSEDADLLLLDEPTNHLDEKSLQFLIQQLKHYN    150

BSNT_00969___    151 GTVILVSHDRYFLDEAATKIWSLEDQTLIEFKGNYSGYMKFREKKRLTQQ    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm    151 GTVILVSHDRYFLDEAATKIWSLEDQTLIEFKGNYSGYMKFREKKRLTQQ    200

BSNT_00969___    201 REYEKQQKMVERIEAQMNGLASWSEKAHAQSTKKEGFKEYHRVKAKRTDA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm    201 REYEKQQKMVERIEAQMNGLASWSEKAHAQSTKKEGFKEYHRVKAKRTDA    250

BSNT_00969___    251 QIKSKQKRLEKELEKAKAEPVTPEYTVRFSIDTTHKTGKRFLEVQNVTKA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm    251 QIKSKQKRLEKELEKAKAEPVTPEYTVRFSIDTTHKTGKRFLEVQNVTKA    300

BSNT_00969___    301 FGERTLFKNANFTIQHGEKVAIIGPNGSGKTTLLNIILGQETAEGSVWVS    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm    301 FGERTLFKNANFTIQHGEKVAIIGPNGSGKTTLLNIILGQETAEGSVWVS    350

BSNT_00969___    351 PSANIGYLTQEVFDLPLEQTPEELFENETFKARGHVQNLMRHLGFTAAQW    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm    351 PSANIGYLTQEVFDLPLEQTPEELFENETFKARGHVQNLMRHLGFTAAQW    400

BSNT_00969___    401 TEPIKHMSMGERVKIKLMAYILEEKDVLILDEPTNHLDLPSREQLEETLS    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm    401 TEPIKHMSMGERVKIKLMAYILEEKDVLILDEPTNHLDLPSREQLEETLS    450

BSNT_00969___    451 QYSGTLLAVSHDRYFLEKTTNSKLVISNNGIKKQLNDAAPSERNEREELR    500
                     |||||||||||||||||||||||||||||||:||||| .|||||||||||
BSU05610___vm    451 QYSGTLLAVSHDRYFLEKTTNSKLVISNNGIEKQLND-VPSERNEREELR    499

BSNT_00969___    501 LKLETERQEVLGKLSFMTPNDKGYKELDQAFNELTKRIKELDHQDKND    548
                     ||||||||||||||||||||||||||||||||||||||||||||||.|
BSU05610___vm    500 LKLETERQEVLGKLSFMTPNDKGYKELDQAFNELTKRIKELDHQDKKD    547


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