Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00969 and BSU05610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:26
# Commandline: needle
# -asequence dna-align/BSNT_00969___expZ.1.22522.seq
# -bsequence dna-align/BSU05610___vmlR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00969___expZ-BSU05610___vmlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00969___expZ-BSU05610___vmlR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00969___expZ
# 2: BSU05610___vmlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1647
# Identity: 1614/1647 (98.0%)
# Similarity: 1614/1647 (98.0%)
# Gaps: 3/1647 ( 0.2%)
# Score: 7939.0
#
#
#=======================================
BSNT_00969___ 1 ATGAAAGAGATTGTAACATTAACAAACGTTAGCTATGAAGTAAAGGATCA 50
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1 ATGAAAGAGATCGTAACATTAACAAACGTTAGCTATGAAGTAAAGGATCA 50
BSNT_00969___ 51 AACTGTTTTTAAACATGTAAACGCCAGTGTTCAGCAAGGAGATATCATTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 51 AACTGTTTTTAAACATGTAAACGCCAGTGTTCAGCAAGGAGATATCATTG 100
BSNT_00969___ 101 GGATTACCGGAAAAAACGGCGCTGGGAAATCTACGCTGCTGCACCTCATT 150
||||||.|||.||||||||||||||||||||||||.||||||||||||||
BSU05610___vm 101 GGATTATCGGCAAAAACGGCGCTGGGAAATCTACGTTGCTGCACCTCATT 150
BSNT_00969___ 151 CACACTGACTTAGCCCCTTCACAGGGACAAATCCTTCGGAAGGATATAAA 200
||||.|||||||||||||.|||||||.|||||||||||||||||||||||
BSU05610___vm 151 CACAATGACTTAGCCCCTGCACAGGGTCAAATCCTTCGGAAGGATATAAA 200
BSNT_00969___ 201 ACTGGCTTTGGTTGAACAGGAAACCGCGGCGTATTCCTTTGCGGATCAGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 201 ACTGGCTTTGGTTGAACAGGAAACCGCGGCGTATTCCTTTGCGGATCAGA 250
BSNT_00969___ 251 CACCTGCCGAAAAGAAGTTACTGGAGAAATGGCATGTGCCTCTTCGTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 251 CACCTGCCGAAAAGAAGTTACTGGAGAAATGGCATGTGCCTCTTCGTGAT 300
BSNT_00969___ 301 TTTCATCAGTTAAGCGGCGGTGAAAAACTGAAAGCGCGGCTGGCGAAAGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 301 TTTCATCAGTTAAGCGGCGGTGAAAAACTGAAAGCGCGGCTGGCGAAAGG 350
BSNT_00969___ 351 ACTATCAGAGGATGCAGATCTGCTGCTGTTAGATGAACCGACAAACCACC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 351 ACTATCAGAGGATGCAGATCTGCTGCTGTTAGATGAACCGACAAACCACC 400
BSNT_00969___ 401 TTGATGAAAAAAGCTTGCAATTTCTCATCCAACATCTGAAACATTATAGC 450
||||||||||||||||||||||||||||||||||.|||||||||||||.|
BSU05610___vm 401 TTGATGAAAAAAGCTTGCAATTTCTCATCCAACAGCTGAAACATTATAAC 450
BSNT_00969___ 451 GGCACTGTGATTCTCGTTTCTCACGATCGATATTTTTTAGACGAAGCCGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 451 GGCACTGTGATTCTCGTTTCTCACGATCGATATTTTTTAGACGAAGCCGC 500
BSNT_00969___ 501 AACAAAAATATGGTCGCTTGAGGATCAGACGCTGATTGAATTCAAAGGGA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 501 AACAAAAATATGGTCGCTTGAGGATCAGACGCTGATTGAATTCAAAGGGA 550
BSNT_00969___ 551 ATTACTCCGGGTATATGAAGTTCCGGGAGAAGAAAAGACTCACCCAGCAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 551 ATTACTCCGGGTATATGAAGTTCCGGGAGAAGAAAAGACTCACCCAGCAG 600
BSNT_00969___ 601 CGTGAATATGAAAAGCAGCAAAAAATGGTTGAACGGATTGAAGCACAAAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 601 CGTGAATATGAAAAGCAGCAAAAAATGGTTGAACGGATTGAAGCACAAAT 650
BSNT_00969___ 651 GAATGGGCTCGCTTCTTGGTCGGAAAAAGCCCACGCCCAATCGACGAAAA 700
|||||||||||||||||||||||||||||||||.||.|||||||||||||
BSU05610___vm 651 GAATGGGCTCGCTTCTTGGTCGGAAAAAGCCCATGCTCAATCGACGAAAA 700
BSNT_00969___ 701 AGGAAGGGTTTAAAGAATATCATAGGGTAAAAGCGAAGCGTACGGATGCC 750
||||||||||||||||||||||..||||||||||||||||||||||||||
BSU05610___vm 701 AGGAAGGGTTTAAAGAATATCACCGGGTAAAAGCGAAGCGTACGGATGCC 750
BSNT_00969___ 751 CAGATTAAATCCAAGCAGAAGCGGCTTGAAAAAGAGCTGGAAAAAGCAAA 800
|||||.||||||||||||||||||||||||||||||||.|||||||||||
BSU05610___vm 751 CAGATAAAATCCAAGCAGAAGCGGCTTGAAAAAGAGCTTGAAAAAGCAAA 800
BSNT_00969___ 801 GGCGGAACCCGTTACCCCAGAATATACAGTCCGCTTTTCAATCGATACAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 801 GGCGGAACCCGTTACCCCAGAATATACAGTCCGCTTTTCAATCGATACAA 850
BSNT_00969___ 851 CCCACAAAACAGGAAAACGTTTTTTAGAAGTTCAGAATGTAACAAAAGCG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 851 CCCACAAAACAGGAAAACGTTTTTTAGAAGTTCAGAATGTAACAAAAGCG 900
BSNT_00969___ 901 TTTGGAGAAAGGACCCTCTTTAAAAACGCAAACTTTACGATTCAGCACGG 950
||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU05610___vm 901 TTTGGAGAAAGGACTCTCTTTAAAAACGCAAACTTTACAATTCAGCACGG 950
BSNT_00969___ 951 CGAAAAGGTTGCGATCATAGGCCCCAATGGCAGCGGAAAAACGACATTAC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 951 CGAAAAGGTTGCGATCATAGGCCCCAATGGCAGCGGAAAAACGACATTAC 1000
BSNT_00969___ 1001 TGAACATCATTCTGGGACAGGAAACAGCAGAAGGAAGTGTATGGGTGTCG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1001 TGAACATCATTCTGGGACAGGAAACAGCAGAAGGAAGTGTATGGGTGTCG 1050
BSNT_00969___ 1051 CCGTCTGCAAACATCGGCTATTTAACGCAGGAGGTGTTTGATTTGCCTTT 1100
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1051 CCGTCCGCAAACATCGGCTATTTAACGCAGGAGGTGTTTGATTTGCCTTT 1100
BSNT_00969___ 1101 AGAACAAACACCGGAAGAGTTATTTGAGAATGAAACATTTAAAGCAAGAG 1150
|||||||||||||||||||||||||||||||||||||||.||||||||.|
BSU05610___vm 1101 AGAACAAACACCGGAAGAGTTATTTGAGAATGAAACATTCAAAGCAAGGG 1150
BSNT_00969___ 1151 GGCACGTTCAAAATCTGATGAGACACTTAGGTTTTACAGCTGCCCAATGG 1200
||||||||||||||||||||||.|||||||||||||||||.|||||||||
BSU05610___vm 1151 GGCACGTTCAAAATCTGATGAGGCACTTAGGTTTTACAGCCGCCCAATGG 1200
BSNT_00969___ 1201 ACTGAACCGATCAAGCATATGAGTATGGGTGAGCGTGTAAAGATCAAGCT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1201 ACTGAACCGATCAAGCATATGAGTATGGGTGAGCGTGTAAAGATCAAGCT 1250
BSNT_00969___ 1251 GATGGCATATATTCTGGAGGAAAAAGACGTGCTGATTTTAGATGAGCCGA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1251 GATGGCATATATTCTGGAGGAAAAAGACGTGCTGATTTTAGATGAGCCGA 1300
BSNT_00969___ 1301 CAAACCATCTCGACCTGCCTTCACGCGAACAGCTGGAAGAAACACTGTCA 1350
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU05610___vm 1301 CAAACCATCTCGACCTGCCGTCACGCGAACAGCTGGAAGAAACACTGTCA 1350
BSNT_00969___ 1351 CAATACAGCGGCACATTGCTGGCGGTATCACATGACCGATACTTTCTCGA 1400
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05610___vm 1351 CAATACAGCGGCACATTGCTGGCGGTTTCACATGACCGATACTTTCTCGA 1400
BSNT_00969___ 1401 AAAAACAACAAACAGTAAACTCGTCATCTCAAACAACGGCATCAAAAAGC 1450
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU05610___vm 1401 AAAAACAACAAACAGTAAACTCGTCATCTCAAACAACGGCATCGAAAAGC 1450
BSNT_00969___ 1451 AGTTAAATGACGCCGCTCCTTCTGAAAGAAATGAGCGGGAAGAGCTTCGG 1500
|||||| |||.||.||||||.|||||||||||||||||.|||||||||
BSU05610___vm 1451 AGTTAA---ACGACGTTCCTTCAGAAAGAAATGAGCGGGAGGAGCTTCGG 1497
BSNT_00969___ 1501 TTAAAGCTTGAGACAGAAAGACAAGAAGTGCTGGGAAAGCTCAGTTTTAT 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1498 TTAAAGCTTGAGACAGAAAGACAAGAAGTGCTGGGAAAGCTCAGTTTTAT 1547
BSNT_00969___ 1551 GACGCCAAATGATAAAGGGTATAAGGAGCTTGATCAGGCTTTCAATGAGC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05610___vm 1548 GACGCCAAATGATAAAGGGTATAAGGAGCTTGATCAGGCTTTCAATGAGC 1597
BSNT_00969___ 1601 TTACGAAACGAATAAAAGAGCTGGATCATCAAGACAAAAATGACTGA 1647
||||||||||||||||||||||||||||||||||||||||.||||||
BSU05610___vm 1598 TTACGAAACGAATAAAAGAGCTGGATCATCAAGACAAAAAAGACTGA 1644
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