Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00959 and BSU05530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:25
# Commandline: needle
# -asequence pep-align/BSNT_00959.1.22522.seq
# -bsequence pep-align/BSU05530___ydfR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00959-BSU05530___ydfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00959-BSU05530___ydfR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00959
# 2: BSU05530___ydfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 107/225 (47.6%)
# Similarity: 109/225 (48.4%)
# Gaps: 114/225 (50.7%)
# Score: 549.0
#
#
#=======================================
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 1 MNRLPFGYIKLRLAGRKANPMTNLIHHWSGGSMNFTWESLVLIVAGVILL 50
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 51 RISGRKSIAQMTSTQTVVMISIGTIIVQPIIEYSLFKTLIAAAIFTSTLI 100
BSNT_00959 1 --------------MLTGEAKVVIENGQLHIENLKKMRLTVDQLEMQLRL 36
||||:||:||||||||||||||||||.|||||||||
BSU05530___yd 101 VMEWIQMKSNTIEKMLTGKAKIVIENGQLHIENLKKMRLTADQLEMQLRL 150
BSNT_00959 37 HGVTGIQDVKIATLEANGQLGIELTDDAKPLTVRDLKKLIHPDFINKDGQ 86
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05530___yd 151 HGVTAIQDVKIATLEANGQLGIELTDDAKPLTVRDLKKLIHPDFINKDGQ 200
BSNT_00959 87 AQSGNQNIFDEVGKKNKKNVPKKLH 111
|||||||||||||||||||||||||
BSU05530___yd 201 AQSGNQNIFDEVGKKNKKNVPKKLH 225
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