Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00959 and BSU05530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:25
# Commandline: needle
# -asequence dna-align/BSNT_00959.1.22522.seq
# -bsequence dna-align/BSU05530___ydfR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00959-BSU05530___ydfR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00959-BSU05530___ydfR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00959
# 2: BSU05530___ydfR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity: 325/678 (47.9%)
# Similarity: 325/678 (47.9%)
# Gaps: 342/678 (50.4%)
# Score: 1581.0
#
#
#=======================================
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 1 ATGAACCGACTGCCTTTCGGATATATTAAATTGCGATTGGCCGGAAGAAA 50
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 51 AGCCAATCCCATGACAAATCTAATTCATCATTGGTCAGGTGGTAGCATGA 100
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 101 ATTTCACTTGGGAATCTCTTGTTCTCATTGTAGCCGGGGTCATTTTGCTG 150
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 151 AGAATTTCAGGAAGGAAATCAATCGCACAAATGACGTCGACTCAAACGGT 200
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 201 TGTCATGATTTCGATCGGAACTATTATCGTTCAGCCAATCATCGAGTACA 250
BSNT_00959 0 -------------------------------------------------- 0
BSU05530___yd 251 GCCTCTTCAAAACATTAATTGCAGCGGCAATTTTCACAAGCACACTCATC 300
BSNT_00959 1 ------------------------------------------ATGTTGAC 8
|||||.||
BSU05530___yd 301 GTTATGGAATGGATCCAAATGAAATCGAACACCATTGAAAAGATGTTAAC 350
BSNT_00959 9 CGGAGAAGCAAAAGTTGTTATTGAAAACGGACAGCTTCATATCGAAAACT 58
||||.||||||||.|.||.|||||||||||||||||||||||||||||||
BSU05530___yd 351 CGGAAAAGCAAAAATCGTCATTGAAAACGGACAGCTTCATATCGAAAACT 400
BSNT_00959 59 TAAAGAAGATGAGACTTACAGTTGATCAGCTTGAAATGCAGCTACGGCTT 108
|||||||||||||||||||||.|||.||||||||||||||||||.|||||
BSU05530___yd 401 TAAAGAAGATGAGACTTACAGCTGACCAGCTTGAAATGCAGCTAAGGCTT 450
BSNT_00959 109 CACGGCGTTACGGGTATACAAGATGTCAAAATTGCGACATTAGAGGCAAA 158
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05530___yd 451 CACGGCGTTACGGCTATACAAGATGTCAAAATTGCGACATTAGAGGCAAA 500
BSNT_00959 159 CGGGCAATTAGGAATTGAATTGACTGATGACGCCAAGCCTTTAACAGTCA 208
|||||||||||||||.|||||.||||||||||||||||||||||||||||
BSU05530___yd 501 CGGGCAATTAGGAATAGAATTAACTGATGACGCCAAGCCTTTAACAGTCA 550
BSNT_00959 209 GGGATCTGAAAAAACTCATTCACCCCGATTTCATAAATAAGGACGGACAA 258
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05530___yd 551 GGGATCTGAAAAAACTCATTCACCCCGATTTCATAAATAAGGACGGACAA 600
BSNT_00959 259 GCCCAGTCTGGCAATCAGAATATTTTTGATGAAGTTGGCAAAAAAAATAA 308
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05530___yd 601 GCCCAGTCTGGCAATCAGAATATTTTTGATGAAGTTGGCAAAAAAAATAA 650
BSNT_00959 309 AAAAAACGTCCCTAAAAAGCTGCATTAA 336
||||||||||||||||||||||||||||
BSU05530___yd 651 AAAAAACGTCCCTAAAAAGCTGCATTAA 678
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