Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00941 and BSU05460

See DNA alignment / Visit BSNT_00941 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:24
# Commandline: needle
#    -asequence pep-align/BSNT_00941___ydfL.1.22522.seq
#    -bsequence pep-align/BSU05460___ydfL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00941___ydfL-BSU05460___ydfL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00941___ydfL-BSU05460___ydfL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00941___ydfL
# 2: BSU05460___ydfL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     269/270 (99.6%)
# Similarity:   269/270 (99.6%)
# Gaps:           0/270 ( 0.0%)
# Score: 1375.0
# 
#
#=======================================

BSNT_00941___      1 MKEFFSIGEVSKLFNVKISALRYYDEIGLLKPEYKDEQTNYRYYSTQQFE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd      1 MKEFFSIGEVSKLFNVKISALRYYDEIGLLKPEYKDEQTNYRYYSTQQFE     50

BSNT_00941___     51 RLDTIKYLRALGLPINKLLDFYNSQNTNTLLHLLKSQQAEIDRKKKELER    100
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05460___yd     51 RLDTIKYLRALGLPINKLLDFYNSQNTNTLLHLLKSQQVEIDRKKKELER    100

BSNT_00941___    101 IERKISRRITHIEDAVNMPLHQISKIKLPAMRVAYLQHEYVLGHDIEHSL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    101 IERKISRRITHIEDAVNMPLHQISKIKLPAMRVAYLQHEYVLGHDIEHSL    150

BSNT_00941___    151 AELRTHLNVNEDIFIGKIGLSISAANVKAKQFDKYSSIFMILEDENEKTS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    151 AELRTHLNVNEDIFIGKIGLSISAANVKAKQFDKYSSIFMILEDENEKTS    200

BSNT_00941___    201 SEIIFPSREYLQIRFKGSHPEAEPYYKKLLAYMKEHHYEVAGDSIEITLI    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    201 SEIIFPSREYLQIRFKGSHPEAEPYYKKLLAYMKEHHYEVAGDSIEITLI    250

BSNT_00941___    251 DYGITNNLDNYVTEILLPIK    270
                     ||||||||||||||||||||
BSU05460___yd    251 DYGITNNLDNYVTEILLPIK    270


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.