Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00941 and BSU05460

See Amino acid alignment / Visit BSNT_00941 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:24
# Commandline: needle
#    -asequence dna-align/BSNT_00941___ydfL.1.22522.seq
#    -bsequence dna-align/BSU05460___ydfL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00941___ydfL-BSU05460___ydfL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00941___ydfL-BSU05460___ydfL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00941___ydfL
# 2: BSU05460___ydfL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     803/813 (98.8%)
# Similarity:   803/813 (98.8%)
# Gaps:           0/813 ( 0.0%)
# Score: 3975.0
# 
#
#=======================================

BSNT_00941___      1 ATGAAGGAATTTTTTTCGATTGGAGAAGTGTCAAAGTTATTCAATGTGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd      1 ATGAAGGAATTTTTTTCGATTGGAGAAGTGTCAAAGTTATTCAATGTGAA     50

BSNT_00941___     51 AATCTCTGCTCTTCGGTATTATGATGAAATCGGCCTTTTGAAACCGGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd     51 AATCTCTGCTCTTCGGTATTATGATGAAATCGGCCTTTTGAAACCGGAAT    100

BSNT_00941___    101 ATAAAGATGAGCAAACGAACTATAGGTATTATTCTACCCAACAGTTTGAG    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU05460___yd    101 ATAAAGATGAGCAAACGAACTATAGATATTATTCTACCCAACAGTTTGAG    150

BSNT_00941___    151 CGGCTTGATACCATCAAGTATTTGAGGGCCCTAGGCCTGCCAATCAATAA    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    151 CGGCTGGATACCATCAAGTATTTGAGGGCCCTAGGCCTGCCAATCAATAA    200

BSNT_00941___    201 GCTTCTTGATTTTTATAACTCTCAAAATACAAACACTCTTCTTCATTTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    201 GCTTCTTGATTTTTATAACTCTCAAAATACAAACACTCTTCTTCATTTAC    250

BSNT_00941___    251 TAAAAAGCCAGCAGGCTGAAATTGATCGCAAAAAGAAAGAATTGGAACGC    300
                     |||||||||||||||.|||||||||||||||.||||||||||||||||||
BSU05460___yd    251 TAAAAAGCCAGCAGGTTGAAATTGATCGCAAGAAGAAAGAATTGGAACGC    300

BSNT_00941___    301 ATCGAACGAAAGATCTCCCGACGCATCACACATATAGAAGATGCCGTTAA    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    301 ATTGAACGAAAGATCTCCCGACGCATCACACATATAGAAGATGCCGTTAA    350

BSNT_00941___    351 CATGCCGTTACATCAAATTTCAAAAATCAAACTTCCCGCAATGCGTGTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    351 CATGCCGTTACATCAAATTTCAAAAATCAAACTTCCCGCAATGCGTGTGG    400

BSNT_00941___    401 CTTACTTGCAGCATGAATATGTTCTCGGCCATGATATCGAACATTCGTTA    450
                     |.||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    401 CCTATTTGCAGCATGAATATGTTCTCGGCCATGATATCGAACATTCGTTA    450

BSNT_00941___    451 GCTGAATTGAGAACCCACCTGAATGTAAACGAAGATATATTCATAGGCAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    451 GCTGAATTGAGAACCCACCTGAATGTAAACGAAGATATATTCATAGGCAA    500

BSNT_00941___    501 GATCGGTTTATCCATTTCTGCAGCAAATGTGAAAGCAAAACAGTTTGACA    550
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    501 GATTGGTTTATCCATTTCTGCAGCAAATGTGAAAGCAAAACAGTTTGACA    550

BSNT_00941___    551 AATATTCCAGTATATTTATGATTCTTGAAGATGAAAATGAAAAAACTTCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    551 AATATTCCAGTATATTTATGATTCTTGAAGATGAAAATGAAAAAACTTCT    600

BSNT_00941___    601 TCAGAAATCATCTTTCCTTCAAGAGAATATCTGCAAATTAGGTTTAAAGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    601 TCAGAAATCATCTTTCCTTCAAGAGAATATCTGCAAATTAGGTTTAAAGG    650

BSNT_00941___    651 GTCACATCCAGAAGCCGAACCATACTACAAAAAATTACTGGCATATATGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    651 GTCACATCCAGAAGCCGAACCATACTACAAAAAATTACTGGCATATATGA    700

BSNT_00941___    701 AAGAACATCATTATGAGGTAGCAGGGGACTCAATTGAAATCACACTCATT    750
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU05460___yd    701 AAGAACATCATTATGAGGTAGCAGGGGACTCAATCGAAATCACACTCATT    750

BSNT_00941___    751 GATTATGGCATTACGAATAACCTAGATAATTACGTGACTGAAATCCTGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05460___yd    751 GATTATGGCATTACGAATAACCTAGATAATTACGTGACTGAAATCCTGCT    800

BSNT_00941___    801 GCCCATTAAATAA    813
                     ||||||.||||||
BSU05460___yd    801 GCCCATCAAATAA    813


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