Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00900 and BSU05220
See
DNA alignment /
Visit
BSNT_00900 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:20
# Commandline: needle
# -asequence pep-align/BSNT_00900___ydeJ.1.22522.seq
# -bsequence pep-align/BSU05220___ydeJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00900___ydeJ-BSU05220___ydeJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00900___ydeJ-BSU05220___ydeJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00900___ydeJ
# 2: BSU05220___ydeJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 209/225 (92.9%)
# Similarity: 213/225 (94.7%)
# Gaps: 6/225 ( 2.7%)
# Score: 1069.0
#
#
#=======================================
BSNT_00900___ 1 MERNEKMKKHRKIYFCITALLLMILLAGCTGSKNGEAHQPSNQASAVQTD 50
|||.|||.:|.|||||||||||||.||:|||.||||||||||||
BSU05220___yd 1 ------MKKRRKICYCNTALLLMILLAGCTDSKDGEAQQPSNQASAVQTD 44
BSNT_00900___ 51 EKHTEPEERTKIRKDEAEPITESEESATKAANDTSSAEEKSKEDNVLAAY 100
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU05220___yd 45 EKHTEPEESTKIRKDEAEPITESEESATKAANDTSSAEEKSKEDNVLAAY 94
BSNT_00900___ 101 SSEKIEYARVWLQLGPNQEIDELNVRHISAGEPINPNDDTSASYPEDVTQ 150
||||||||||||||||||||||||||||:|||||||||||||||||:|||
BSU05220___yd 95 SSEKIEYARVWLQLGPNQEIDELNVRHIAAGEPINPNDDTSASYPENVTQ 144
BSNT_00900___ 151 LAGSRLVDGSVTYHGNGDGTIHVYNVPLRWDSADDIEKGVMREVTESIIK 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05220___yd 145 LAGSRLVDGSVTYHGNGDGTIHVYNVPLRWDSADDIEKGVMREVTESIIK 194
BSNT_00900___ 201 NRKTVYVDTGDDEKIKRLIDIMMIH 225
|||||||||||||||||||||||||
BSU05220___yd 195 NRKTVYVDTGDDEKIKRLIDIMMIH 219
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.