Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00900 and BSU05220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:20
# Commandline: needle
# -asequence dna-align/BSNT_00900___ydeJ.1.22522.seq
# -bsequence dna-align/BSU05220___ydeJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00900___ydeJ-BSU05220___ydeJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00900___ydeJ-BSU05220___ydeJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00900___ydeJ
# 2: BSU05220___ydeJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity: 641/678 (94.5%)
# Similarity: 641/678 (94.5%)
# Gaps: 18/678 ( 2.7%)
# Score: 3129.0
#
#
#=======================================
BSNT_00900___ 1 ATGGAGAGGAATGAAAAAATGAAGAAACACAGAAAGATATATTTTTGTAT 50
||||||||||.|||||||||||.||.|||.|.
BSU05220___yd 1 ------------------ATGAAGAAACGCAGAAAGATATGTTATTGCAA 32
BSNT_00900___ 51 TACTGCCCTGCTGCTCATGATTTTGCTTGCTGGATGTACGGGCAGTAAGA 100
|||||||||||||||.|||||||||||||||||||||||||.|||||||.
BSU05220___yd 33 TACTGCCCTGCTGCTTATGATTTTGCTTGCTGGATGTACGGACAGTAAGG 82
BSNT_00900___ 101 ATGGAGAAGCACATCAACCTTCAAATCAAGCTTCTGCTGTGCAAACTGAC 150
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05220___yd 83 ATGGAGAAGCACAACAACCTTCAAATCAAGCTTCTGCTGTGCAAACTGAC 132
BSNT_00900___ 151 GAAAAACACACTGAGCCTGAAGAGAGAACCAAAATACGCAAGGATGAAGC 200
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05220___yd 133 GAAAAACACACTGAGCCTGAAGAGAGCACCAAAATACGCAAGGATGAAGC 182
BSNT_00900___ 201 GGAGCCAATAACAGAATCAGAAGAATCCGCAACAAAAGCTGCAAATGATA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05220___yd 183 GGAGCCAATAACAGAATCAGAAGAATCCGCAACAAAAGCTGCAAATGATA 232
BSNT_00900___ 251 CCTCTTCAGCAGAGGAGAAAAGCAAAGAAGACAATGTATTGGCAGCATAC 300
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05220___yd 233 CCTCTTCAGCAGAAGAGAAAAGCAAAGAAGACAATGTATTGGCAGCATAC 282
BSNT_00900___ 301 TCTTCGGAAAAAATTGAATATGCCAGGGTTTGGCTTCAACTGGGACCTAA 350
||||||||||||||||||||||||||.||||||||||||||.||||||||
BSU05220___yd 283 TCTTCGGAAAAAATTGAATATGCCAGAGTTTGGCTTCAACTTGGACCTAA 332
BSNT_00900___ 351 TCAAGAGATAGATGAATTAAACGTTCGACATATTTCGGCTGGCGAGCCAA 400
|||||||||||||||||||||.||||||||||||.|||||||||||||||
BSU05220___yd 333 TCAAGAGATAGATGAATTAAATGTTCGACATATTGCGGCTGGCGAGCCAA 382
BSNT_00900___ 401 TTAATCCTAATGATGATACAAGTGCCAGCTATCCAGAAGATGTGACCCAG 450
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05220___yd 383 TTAATCCTAATGATGATACAAGTGCCAGCTATCCAGAAAATGTGACCCAG 432
BSNT_00900___ 451 TTGGCAGGTTCTCGTTTAGTGGATGGATCAGTCACTTATCATGGCAATGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05220___yd 433 TTGGCAGGTTCTCGTTTAGTGGATGGATCAGTCACTTATCATGGCAATGG 482
BSNT_00900___ 501 GGATGGCACGATTCATGTATATAATGTGCCTTTACGCTGGGATTCCGCTG 550
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU05220___yd 483 GGATGGCACAATTCATGTATATAATGTGCCTTTACGCTGGGATTCCGCTG 532
BSNT_00900___ 551 ATGATATAGAAAAAGGCGTCATGAGGGAAGTGACTGAGAGTATCATAAAA 600
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU05220___yd 533 ATGATATAGAAAAAGGCGTCATGCGGGAAGTGACTGAGAGTATCATAAAA 582
BSNT_00900___ 601 AACAGAAAAACAGTGTACGTTGATACAGGCGACGATGAAAAAATCAAACG 650
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05220___yd 583 AACAGAAAAACAGTGTACGTTGATACAGGCGACGATGAAAAAATCAAGCG 632
BSNT_00900___ 651 GCTCATTGATATCATGATGATTCATTAA 678
||||||||||||||||||||||||||||
BSU05220___yd 633 GCTCATTGATATCATGATGATTCATTAA 660
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