Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00900 and BSU05220

See Amino acid alignment / Visit BSNT_00900 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:20
# Commandline: needle
#    -asequence dna-align/BSNT_00900___ydeJ.1.22522.seq
#    -bsequence dna-align/BSU05220___ydeJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00900___ydeJ-BSU05220___ydeJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00900___ydeJ-BSU05220___ydeJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00900___ydeJ
# 2: BSU05220___ydeJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity:     641/678 (94.5%)
# Similarity:   641/678 (94.5%)
# Gaps:          18/678 ( 2.7%)
# Score: 3129.0
# 
#
#=======================================

BSNT_00900___      1 ATGGAGAGGAATGAAAAAATGAAGAAACACAGAAAGATATATTTTTGTAT     50
                                       ||||||||||.|||||||||||.||.|||.|.
BSU05220___yd      1 ------------------ATGAAGAAACGCAGAAAGATATGTTATTGCAA     32

BSNT_00900___     51 TACTGCCCTGCTGCTCATGATTTTGCTTGCTGGATGTACGGGCAGTAAGA    100
                     |||||||||||||||.|||||||||||||||||||||||||.|||||||.
BSU05220___yd     33 TACTGCCCTGCTGCTTATGATTTTGCTTGCTGGATGTACGGACAGTAAGG     82

BSNT_00900___    101 ATGGAGAAGCACATCAACCTTCAAATCAAGCTTCTGCTGTGCAAACTGAC    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05220___yd     83 ATGGAGAAGCACAACAACCTTCAAATCAAGCTTCTGCTGTGCAAACTGAC    132

BSNT_00900___    151 GAAAAACACACTGAGCCTGAAGAGAGAACCAAAATACGCAAGGATGAAGC    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05220___yd    133 GAAAAACACACTGAGCCTGAAGAGAGCACCAAAATACGCAAGGATGAAGC    182

BSNT_00900___    201 GGAGCCAATAACAGAATCAGAAGAATCCGCAACAAAAGCTGCAAATGATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05220___yd    183 GGAGCCAATAACAGAATCAGAAGAATCCGCAACAAAAGCTGCAAATGATA    232

BSNT_00900___    251 CCTCTTCAGCAGAGGAGAAAAGCAAAGAAGACAATGTATTGGCAGCATAC    300
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05220___yd    233 CCTCTTCAGCAGAAGAGAAAAGCAAAGAAGACAATGTATTGGCAGCATAC    282

BSNT_00900___    301 TCTTCGGAAAAAATTGAATATGCCAGGGTTTGGCTTCAACTGGGACCTAA    350
                     ||||||||||||||||||||||||||.||||||||||||||.||||||||
BSU05220___yd    283 TCTTCGGAAAAAATTGAATATGCCAGAGTTTGGCTTCAACTTGGACCTAA    332

BSNT_00900___    351 TCAAGAGATAGATGAATTAAACGTTCGACATATTTCGGCTGGCGAGCCAA    400
                     |||||||||||||||||||||.||||||||||||.|||||||||||||||
BSU05220___yd    333 TCAAGAGATAGATGAATTAAATGTTCGACATATTGCGGCTGGCGAGCCAA    382

BSNT_00900___    401 TTAATCCTAATGATGATACAAGTGCCAGCTATCCAGAAGATGTGACCCAG    450
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05220___yd    383 TTAATCCTAATGATGATACAAGTGCCAGCTATCCAGAAAATGTGACCCAG    432

BSNT_00900___    451 TTGGCAGGTTCTCGTTTAGTGGATGGATCAGTCACTTATCATGGCAATGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05220___yd    433 TTGGCAGGTTCTCGTTTAGTGGATGGATCAGTCACTTATCATGGCAATGG    482

BSNT_00900___    501 GGATGGCACGATTCATGTATATAATGTGCCTTTACGCTGGGATTCCGCTG    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU05220___yd    483 GGATGGCACAATTCATGTATATAATGTGCCTTTACGCTGGGATTCCGCTG    532

BSNT_00900___    551 ATGATATAGAAAAAGGCGTCATGAGGGAAGTGACTGAGAGTATCATAAAA    600
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU05220___yd    533 ATGATATAGAAAAAGGCGTCATGCGGGAAGTGACTGAGAGTATCATAAAA    582

BSNT_00900___    601 AACAGAAAAACAGTGTACGTTGATACAGGCGACGATGAAAAAATCAAACG    650
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05220___yd    583 AACAGAAAAACAGTGTACGTTGATACAGGCGACGATGAAAAAATCAAGCG    632

BSNT_00900___    651 GCTCATTGATATCATGATGATTCATTAA    678
                     ||||||||||||||||||||||||||||
BSU05220___yd    633 GCTCATTGATATCATGATGATTCATTAA    660


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