Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00861 and BSU04990

See DNA alignment / Visit BSNT_00861 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:18
# Commandline: needle
#    -asequence pep-align/BSNT_00861___yddJ.1.22522.seq
#    -bsequence pep-align/BSU04990___yddJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00861___yddJ-BSU04990___yddJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00861___yddJ-BSU04990___yddJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00861___yddJ
# 2: BSU04990___yddJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 129
# Identity:     120/129 (93.0%)
# Similarity:   124/129 (96.1%)
# Gaps:           3/129 ( 2.3%)
# Score: 641.0
# 
#
#=======================================

BSNT_00861___      1 MFILKNLFIFLSLMMMFVLTACGGSKYDDAIDDVISQYKEHKGNDTEINI     50
                        :||||||||||||||||||||||||||||||||||||||||||||||
BSU04990___yd      1 ---MKNLFIFLSLMMMFVLTACGGSKYDDAIDDVISQYKEHKGNDTEINI     47

BSNT_00861___     51 KRENAIVRVYEGGKYIQFAFYMPDNSSRELTTFKYYEKIGDKYEKMTDMP    100
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU04990___yd     48 KRENAIVRVYEGGKYIQFAFYMPDNSSRELTTFKYYEKFGDKYEKMTDMP     97

BSNT_00861___    101 GNGENDRLGLSRKTPDYEEAKGKETKLEE    129
                     |||||||||||:|||||||.||:||:|||
BSU04990___yd     98 GNGENDRLGLSKKTPDYEEVKGEETELEE    126


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.